Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SPG7Q9UQ90 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SPG7Q9UQ90 WWC2-AS2-201ENST00000578387 2183 ntBASIC26.03■■□□□ 1.76
SPG7Q9UQ90 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SPG7Q9UQ90 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
SPG7Q9UQ90 STK25-204ENST00000405585 1643 ntTSL 2 BASIC26.03■■□□□ 1.76
SPG7Q9UQ90 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SPG7Q9UQ90 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
SPG7Q9UQ90 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC26.02■■□□□ 1.76
SPG7Q9UQ90 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC26.02■■□□□ 1.76
SPG7Q9UQ90 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC26.02■■□□□ 1.76
SPG7Q9UQ90 ARMC10P1-201ENST00000313754 855 ntBASIC26.02■■□□□ 1.76
SPG7Q9UQ90 NT5C-211ENST00000582170 653 ntTSL 3 BASIC26.02■■□□□ 1.76
SPG7Q9UQ90 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC26.02■■□□□ 1.76
SPG7Q9UQ90 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SPG7Q9UQ90 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SPG7Q9UQ90 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC26.02■■□□□ 1.76
SPG7Q9UQ90 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SPG7Q9UQ90 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SPG7Q9UQ90 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.75
SPG7Q9UQ90 TERF1P1-201ENST00000311003 1181 ntBASIC26.01■■□□□ 1.75
SPG7Q9UQ90 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.75
SPG7Q9UQ90 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SPG7Q9UQ90 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SPG7Q9UQ90 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC26.01■■□□□ 1.75
SPG7Q9UQ90 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC26.01■■□□□ 1.75
SPG7Q9UQ90 AL137013.1-201ENST00000432946 1228 ntBASIC26.01■■□□□ 1.75
SPG7Q9UQ90 TMA16-209ENST00000513272 803 ntTSL 2 BASIC26.01■■□□□ 1.75
SPG7Q9UQ90 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC26.01■■□□□ 1.75
SPG7Q9UQ90 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
SPG7Q9UQ90 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
SPG7Q9UQ90 CBFB-203ENST00000561924 584 ntTSL 5 BASIC26.01■■□□□ 1.75
SPG7Q9UQ90 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC26.01■■□□□ 1.75
SPG7Q9UQ90 ABBA01031674.1-201ENST00000635145 728 ntBASIC26.01■■□□□ 1.75
SPG7Q9UQ90 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC26.01■■□□□ 1.75
SPG7Q9UQ90 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
SPG7Q9UQ90 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SPG7Q9UQ90 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC26■■□□□ 1.75
SPG7Q9UQ90 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SPG7Q9UQ90 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC26■■□□□ 1.75
SPG7Q9UQ90 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SPG7Q9UQ90 AC018553.1-201ENST00000616682 1458 ntBASIC26■■□□□ 1.75
SPG7Q9UQ90 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC26■■□□□ 1.75
SPG7Q9UQ90 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC26■■□□□ 1.75
SPG7Q9UQ90 KRT18P57-201ENST00000443599 1254 ntBASIC26■■□□□ 1.75
SPG7Q9UQ90 SLC25A3P1-201ENST00000443844 931 ntBASIC26■■□□□ 1.75
SPG7Q9UQ90 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC26■■□□□ 1.75
SPG7Q9UQ90 KRT18P16-201ENST00000510337 1294 ntBASIC26■■□□□ 1.75
SPG7Q9UQ90 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC26■■□□□ 1.75
SPG7Q9UQ90 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC26■■□□□ 1.75
SPG7Q9UQ90 GRAMD4P8-201ENST00000605465 1115 ntBASIC26■■□□□ 1.75
SPG7Q9UQ90 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC26■■□□□ 1.75
SPG7Q9UQ90 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC26■■□□□ 1.75
SPG7Q9UQ90 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
SPG7Q9UQ90 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SPG7Q9UQ90 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SPG7Q9UQ90 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SPG7Q9UQ90 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SPG7Q9UQ90 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC25.99■■□□□ 1.75
SPG7Q9UQ90 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC25.99■■□□□ 1.75
SPG7Q9UQ90 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC25.99■■□□□ 1.75
SPG7Q9UQ90 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC25.99■■□□□ 1.75
SPG7Q9UQ90 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC25.99■■□□□ 1.75
SPG7Q9UQ90 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC25.99■■□□□ 1.75
SPG7Q9UQ90 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SPG7Q9UQ90 AC007225.1-201ENST00000566331 1836 ntBASIC25.99■■□□□ 1.75
SPG7Q9UQ90 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
SPG7Q9UQ90 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SPG7Q9UQ90 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC25.98■■□□□ 1.75
SPG7Q9UQ90 AC073508.3-201ENST00000619697 1419 ntBASIC25.98■■□□□ 1.75
SPG7Q9UQ90 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SPG7Q9UQ90 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
SPG7Q9UQ90 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC25.98■■□□□ 1.75
SPG7Q9UQ90 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC25.98■■□□□ 1.75
SPG7Q9UQ90 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC25.98■■□□□ 1.75
SPG7Q9UQ90 TUBB8P6-201ENST00000436895 1288 ntBASIC25.98■■□□□ 1.75
SPG7Q9UQ90 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC25.98■■□□□ 1.75
SPG7Q9UQ90 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC25.98■■□□□ 1.75
SPG7Q9UQ90 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SPG7Q9UQ90 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
SPG7Q9UQ90 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SPG7Q9UQ90 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
SPG7Q9UQ90 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC25.97■■□□□ 1.75
SPG7Q9UQ90 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SPG7Q9UQ90 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
SPG7Q9UQ90 B3GAT3P1-201ENST00000471720 806 ntBASIC25.97■■□□□ 1.75
SPG7Q9UQ90 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC25.97■■□□□ 1.75
SPG7Q9UQ90 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
SPG7Q9UQ90 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
SPG7Q9UQ90 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC25.97■■□□□ 1.75
SPG7Q9UQ90 DGCR10-201ENST00000609839 495 ntBASIC25.97■■□□□ 1.75
SPG7Q9UQ90 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SPG7Q9UQ90 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
SPG7Q9UQ90 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC25.97■■□□□ 1.75
SPG7Q9UQ90 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC25.96■■□□□ 1.75
SPG7Q9UQ90 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SPG7Q9UQ90 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SPG7Q9UQ90 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
SPG7Q9UQ90 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC25.96■■□□□ 1.75
SPG7Q9UQ90 AP005242.2-201ENST00000580065 1175 ntBASIC25.96■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms