Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPS3Q9UNS2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
COPS3Q9UNS2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COPS3Q9UNS2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COPS3Q9UNS2 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
COPS3Q9UNS2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.65■□□□□ 0.42
COPS3Q9UNS2 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPS3Q9UNS2 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPS3Q9UNS2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COPS3Q9UNS2 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.65■□□□□ 0.42
COPS3Q9UNS2 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
COPS3Q9UNS2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
COPS3Q9UNS2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
COPS3Q9UNS2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPS3Q9UNS2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
COPS3Q9UNS2 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPS3Q9UNS2 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.64■□□□□ 0.41
COPS3Q9UNS2 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
COPS3Q9UNS2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPS3Q9UNS2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COPS3Q9UNS2 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
COPS3Q9UNS2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.64■□□□□ 0.41
COPS3Q9UNS2 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.64■□□□□ 0.41
COPS3Q9UNS2 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.64■□□□□ 0.41
COPS3Q9UNS2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.64■□□□□ 0.41
COPS3Q9UNS2 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.64■□□□□ 0.41
COPS3Q9UNS2 NTF6G-201ENST00000591094 616 ntBASIC17.64■□□□□ 0.41
COPS3Q9UNS2 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPS3Q9UNS2 AC009237.14-201ENST00000609975 1594 ntBASIC17.64■□□□□ 0.41
COPS3Q9UNS2 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COPS3Q9UNS2 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPS3Q9UNS2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COPS3Q9UNS2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPS3Q9UNS2 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPS3Q9UNS2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPS3Q9UNS2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPS3Q9UNS2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPS3Q9UNS2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
COPS3Q9UNS2 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
COPS3Q9UNS2 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
COPS3Q9UNS2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPS3Q9UNS2 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.63■□□□□ 0.41
COPS3Q9UNS2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPS3Q9UNS2 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
COPS3Q9UNS2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPS3Q9UNS2 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPS3Q9UNS2 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COPS3Q9UNS2 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPS3Q9UNS2 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
COPS3Q9UNS2 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPS3Q9UNS2 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPS3Q9UNS2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.63■□□□□ 0.41
COPS3Q9UNS2 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
COPS3Q9UNS2 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPS3Q9UNS2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
COPS3Q9UNS2 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.63■□□□□ 0.41
COPS3Q9UNS2 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
COPS3Q9UNS2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
COPS3Q9UNS2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPS3Q9UNS2 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPS3Q9UNS2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
COPS3Q9UNS2 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
COPS3Q9UNS2 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.63■□□□□ 0.41
COPS3Q9UNS2 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPS3Q9UNS2 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COPS3Q9UNS2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPS3Q9UNS2 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPS3Q9UNS2 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPS3Q9UNS2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPS3Q9UNS2 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.62■□□□□ 0.41
COPS3Q9UNS2 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
COPS3Q9UNS2 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
COPS3Q9UNS2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
COPS3Q9UNS2 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPS3Q9UNS2 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.62■□□□□ 0.41
COPS3Q9UNS2 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPS3Q9UNS2 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPS3Q9UNS2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.62■□□□□ 0.41
COPS3Q9UNS2 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.62■□□□□ 0.41
COPS3Q9UNS2 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPS3Q9UNS2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPS3Q9UNS2 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COPS3Q9UNS2 AC007322.4-201ENST00000509611 723 ntBASIC17.62■□□□□ 0.41
COPS3Q9UNS2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.62■□□□□ 0.41
COPS3Q9UNS2 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COPS3Q9UNS2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COPS3Q9UNS2 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.62■□□□□ 0.41
COPS3Q9UNS2 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
COPS3Q9UNS2 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
COPS3Q9UNS2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPS3Q9UNS2 KRT8P17-201ENST00000453110 1448 ntBASIC17.62■□□□□ 0.41
COPS3Q9UNS2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.62■□□□□ 0.41
COPS3Q9UNS2 TNXA-203ENST00000507684 2038 ntBASIC17.62■□□□□ 0.41
COPS3Q9UNS2 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPS3Q9UNS2 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPS3Q9UNS2 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPS3Q9UNS2 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.62■□□□□ 0.41
COPS3Q9UNS2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.62■□□□□ 0.41
COPS3Q9UNS2 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPS3Q9UNS2 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms