Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
UBQLN1Q9UMX0 AP006587.1-201ENST00000534129 1502 ntBASIC21.33■■□□□ 1
UBQLN1Q9UMX0 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
UBQLN1Q9UMX0 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UBQLN1Q9UMX0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.32■■□□□ 1
UBQLN1Q9UMX0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
UBQLN1Q9UMX0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.32■■□□□ 1
UBQLN1Q9UMX0 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
UBQLN1Q9UMX0 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.32■■□□□ 1
UBQLN1Q9UMX0 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UBQLN1Q9UMX0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.32■■□□□ 1
UBQLN1Q9UMX0 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.32■■□□□ 1
UBQLN1Q9UMX0 RPS2P55-201ENST00000397318 883 ntBASIC21.32■■□□□ 1
UBQLN1Q9UMX0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.32■■□□□ 1
UBQLN1Q9UMX0 AC107956.1-201ENST00000494359 873 ntBASIC21.32■■□□□ 1
UBQLN1Q9UMX0 AC233702.5-201ENST00000584107 538 ntBASIC21.32■■□□□ 1
UBQLN1Q9UMX0 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
UBQLN1Q9UMX0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.32■■□□□ 1
UBQLN1Q9UMX0 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.32■■□□□ 1
UBQLN1Q9UMX0 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UBQLN1Q9UMX0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UBQLN1Q9UMX0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
UBQLN1Q9UMX0 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UBQLN1Q9UMX0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UBQLN1Q9UMX0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.31■■□□□ 1
UBQLN1Q9UMX0 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
UBQLN1Q9UMX0 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
UBQLN1Q9UMX0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
UBQLN1Q9UMX0 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.31■■□□□ 1
UBQLN1Q9UMX0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.31■■□□□ 1
UBQLN1Q9UMX0 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
UBQLN1Q9UMX0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
UBQLN1Q9UMX0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.31■■□□□ 1
UBQLN1Q9UMX0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.31■■□□□ 1
UBQLN1Q9UMX0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UBQLN1Q9UMX0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.3■■□□□ 1
UBQLN1Q9UMX0 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
UBQLN1Q9UMX0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.3■■□□□ 1
UBQLN1Q9UMX0 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.3■■□□□ 1
UBQLN1Q9UMX0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.3■■□□□ 1
UBQLN1Q9UMX0 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.3■■□□□ 1
UBQLN1Q9UMX0 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UBQLN1Q9UMX0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.3■■□□□ 1
UBQLN1Q9UMX0 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UBQLN1Q9UMX0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.3■■□□□ 1
UBQLN1Q9UMX0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.3■■□□□ 1
UBQLN1Q9UMX0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
UBQLN1Q9UMX0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UBQLN1Q9UMX0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
UBQLN1Q9UMX0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UBQLN1Q9UMX0 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UBQLN1Q9UMX0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.3■■□□□ 1
UBQLN1Q9UMX0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
UBQLN1Q9UMX0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.29■■□□□ 1
UBQLN1Q9UMX0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.29■■□□□ 1
UBQLN1Q9UMX0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UBQLN1Q9UMX0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
UBQLN1Q9UMX0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UBQLN1Q9UMX0 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UBQLN1Q9UMX0 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.29■■□□□ 1
UBQLN1Q9UMX0 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.29■■□□□ 1
UBQLN1Q9UMX0 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.29■■□□□ 1
UBQLN1Q9UMX0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UBQLN1Q9UMX0 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.29■■□□□ 1
UBQLN1Q9UMX0 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
UBQLN1Q9UMX0 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
UBQLN1Q9UMX0 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.29■■□□□ 1
UBQLN1Q9UMX0 AL596275.1-201ENST00000423464 877 ntBASIC21.29■■□□□ 1
UBQLN1Q9UMX0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.29■■□□□ 1
UBQLN1Q9UMX0 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.29■■□□□ 1
UBQLN1Q9UMX0 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
UBQLN1Q9UMX0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.29■■□□□ 1
UBQLN1Q9UMX0 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.29■■□□□ 1
UBQLN1Q9UMX0 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.29■■□□□ 1
UBQLN1Q9UMX0 AP001412.1-201ENST00000608405 714 ntBASIC21.29■■□□□ 1
UBQLN1Q9UMX0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.29■■□□□ 1
UBQLN1Q9UMX0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.29■■□□□ 1
UBQLN1Q9UMX0 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.29■■□□□ 1
UBQLN1Q9UMX0 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
UBQLN1Q9UMX0 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.29■■□□□ 1
UBQLN1Q9UMX0 AC092667.1-201ENST00000434301 2586 ntBASIC21.29■■□□□ 1
UBQLN1Q9UMX0 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
UBQLN1Q9UMX0 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
UBQLN1Q9UMX0 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UBQLN1Q9UMX0 HTR7P1-201ENST00000538670 1336 ntBASIC21.29■■□□□ 1
UBQLN1Q9UMX0 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
UBQLN1Q9UMX0 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.28■■□□□ 1
UBQLN1Q9UMX0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.28■■□□□ 1
UBQLN1Q9UMX0 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
UBQLN1Q9UMX0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
UBQLN1Q9UMX0 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
UBQLN1Q9UMX0 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.28■■□□□ 1
UBQLN1Q9UMX0 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
UBQLN1Q9UMX0 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.28■■□□□ 1
UBQLN1Q9UMX0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.28■■□□□ 1
UBQLN1Q9UMX0 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
UBQLN1Q9UMX0 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.28■■□□□ 1
UBQLN1Q9UMX0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.28■■□□□ 1
UBQLN1Q9UMX0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
UBQLN1Q9UMX0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms