Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.22■□□□□ 0.67
LRIT1Q9P2V4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRIT1Q9P2V4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.21■□□□□ 0.67
LRIT1Q9P2V4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.21■□□□□ 0.67
LRIT1Q9P2V4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
LRIT1Q9P2V4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
LRIT1Q9P2V4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRIT1Q9P2V4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRIT1Q9P2V4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.21■□□□□ 0.67
LRIT1Q9P2V4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRIT1Q9P2V4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRIT1Q9P2V4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRIT1Q9P2V4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRIT1Q9P2V4 FAM210CP-201ENST00000445714 574 ntBASIC19.21■□□□□ 0.67
LRIT1Q9P2V4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.21■□□□□ 0.67
LRIT1Q9P2V4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRIT1Q9P2V4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.21■□□□□ 0.67
LRIT1Q9P2V4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRIT1Q9P2V4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.21■□□□□ 0.67
LRIT1Q9P2V4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRIT1Q9P2V4 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRIT1Q9P2V4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRIT1Q9P2V4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
LRIT1Q9P2V4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRIT1Q9P2V4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRIT1Q9P2V4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.21■□□□□ 0.67
LRIT1Q9P2V4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
LRIT1Q9P2V4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.21■□□□□ 0.67
LRIT1Q9P2V4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRIT1Q9P2V4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRIT1Q9P2V4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
LRIT1Q9P2V4 AP006587.1-201ENST00000534129 1502 ntBASIC19.2■□□□□ 0.66
LRIT1Q9P2V4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.2■□□□□ 0.66
LRIT1Q9P2V4 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LRIT1Q9P2V4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRIT1Q9P2V4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRIT1Q9P2V4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRIT1Q9P2V4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRIT1Q9P2V4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.2■□□□□ 0.66
LRIT1Q9P2V4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRIT1Q9P2V4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.2■□□□□ 0.66
LRIT1Q9P2V4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRIT1Q9P2V4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
LRIT1Q9P2V4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRIT1Q9P2V4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRIT1Q9P2V4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRIT1Q9P2V4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
LRIT1Q9P2V4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.19■□□□□ 0.66
LRIT1Q9P2V4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRIT1Q9P2V4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.19■□□□□ 0.66
LRIT1Q9P2V4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRIT1Q9P2V4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRIT1Q9P2V4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRIT1Q9P2V4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRIT1Q9P2V4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRIT1Q9P2V4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRIT1Q9P2V4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRIT1Q9P2V4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRIT1Q9P2V4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.19■□□□□ 0.66
LRIT1Q9P2V4 NUDT16P1-203ENST00000513809 620 ntBASIC19.19■□□□□ 0.66
LRIT1Q9P2V4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.19■□□□□ 0.66
LRIT1Q9P2V4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRIT1Q9P2V4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.19■□□□□ 0.66
LRIT1Q9P2V4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRIT1Q9P2V4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.19■□□□□ 0.66
LRIT1Q9P2V4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRIT1Q9P2V4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRIT1Q9P2V4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRIT1Q9P2V4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LRIT1Q9P2V4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
LRIT1Q9P2V4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.19■□□□□ 0.66
LRIT1Q9P2V4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LRIT1Q9P2V4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
LRIT1Q9P2V4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRIT1Q9P2V4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRIT1Q9P2V4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.18■□□□□ 0.66
LRIT1Q9P2V4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.18■□□□□ 0.66
LRIT1Q9P2V4 MMP23A-201ENST00000234610 1017 ntBASIC19.18■□□□□ 0.66
LRIT1Q9P2V4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRIT1Q9P2V4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRIT1Q9P2V4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRIT1Q9P2V4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRIT1Q9P2V4 KRT18P21-201ENST00000515767 1272 ntBASIC19.18■□□□□ 0.66
LRIT1Q9P2V4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.18■□□□□ 0.66
LRIT1Q9P2V4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.18■□□□□ 0.66
LRIT1Q9P2V4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.18■□□□□ 0.66
LRIT1Q9P2V4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.18■□□□□ 0.66
LRIT1Q9P2V4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
LRIT1Q9P2V4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.18■□□□□ 0.66
LRIT1Q9P2V4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRIT1Q9P2V4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.18■□□□□ 0.66
LRIT1Q9P2V4 CR392000.1-201ENST00000624770 1228 ntBASIC19.18■□□□□ 0.66
LRIT1Q9P2V4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.18■□□□□ 0.66
LRIT1Q9P2V4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRIT1Q9P2V4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRIT1Q9P2V4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRIT1Q9P2V4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LRIT1Q9P2V4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRIT1Q9P2V4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRIT1Q9P2V4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms