Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD7Q9P2D1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD7Q9P2D1 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.17■□□□□ 0.98
CHD7Q9P2D1 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.17■□□□□ 0.98
CHD7Q9P2D1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.17■□□□□ 0.98
CHD7Q9P2D1 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.17■□□□□ 0.98
CHD7Q9P2D1 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.17■□□□□ 0.98
CHD7Q9P2D1 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD7Q9P2D1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD7Q9P2D1 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHD7Q9P2D1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHD7Q9P2D1 PCED1CP-201ENST00000419887 785 ntBASIC21.16■□□□□ 0.98
CHD7Q9P2D1 AC246785.2-201ENST00000432512 513 ntBASIC21.16■□□□□ 0.98
CHD7Q9P2D1 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.16■□□□□ 0.98
CHD7Q9P2D1 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.16■□□□□ 0.98
CHD7Q9P2D1 AC083849.1-201ENST00000615227 514 ntBASIC21.16■□□□□ 0.98
CHD7Q9P2D1 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
CHD7Q9P2D1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHD7Q9P2D1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.16■□□□□ 0.98
CHD7Q9P2D1 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHD7Q9P2D1 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHD7Q9P2D1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.16■□□□□ 0.98
CHD7Q9P2D1 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHD7Q9P2D1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHD7Q9P2D1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHD7Q9P2D1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHD7Q9P2D1 AL023803.3-201ENST00000615559 522 ntBASIC21.15■□□□□ 0.98
CHD7Q9P2D1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.15■□□□□ 0.98
CHD7Q9P2D1 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.15■□□□□ 0.98
CHD7Q9P2D1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.15■□□□□ 0.98
CHD7Q9P2D1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHD7Q9P2D1 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CHD7Q9P2D1 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC21.15■□□□□ 0.98
CHD7Q9P2D1 PVRIG2P-201ENST00000435460 978 ntBASIC21.15■□□□□ 0.98
CHD7Q9P2D1 AC092647.4-201ENST00000457211 535 ntBASIC21.15■□□□□ 0.98
CHD7Q9P2D1 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.15■□□□□ 0.98
CHD7Q9P2D1 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.15■□□□□ 0.98
CHD7Q9P2D1 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CHD7Q9P2D1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.15■□□□□ 0.98
CHD7Q9P2D1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.15■□□□□ 0.98
CHD7Q9P2D1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.15■□□□□ 0.98
CHD7Q9P2D1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.15■□□□□ 0.98
CHD7Q9P2D1 RCC2P6-201ENST00000526625 1557 ntBASIC21.15■□□□□ 0.98
CHD7Q9P2D1 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CHD7Q9P2D1 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CHD7Q9P2D1 COX11P1-201ENST00000489116 835 ntBASIC21.15■□□□□ 0.98
CHD7Q9P2D1 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.15■□□□□ 0.98
CHD7Q9P2D1 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.15■□□□□ 0.98
CHD7Q9P2D1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
CHD7Q9P2D1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CHD7Q9P2D1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.98
CHD7Q9P2D1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHD7Q9P2D1 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHD7Q9P2D1 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
CHD7Q9P2D1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.14■□□□□ 0.97
CHD7Q9P2D1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHD7Q9P2D1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.14■□□□□ 0.97
CHD7Q9P2D1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHD7Q9P2D1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHD7Q9P2D1 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHD7Q9P2D1 IER3-202ENST00000376377 1350 ntBASIC21.14■□□□□ 0.97
CHD7Q9P2D1 AL359075.1-203ENST00000462729 1002 ntBASIC21.14■□□□□ 0.97
CHD7Q9P2D1 AC128688.1-201ENST00000487626 519 ntBASIC21.14■□□□□ 0.97
CHD7Q9P2D1 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.14■□□□□ 0.97
CHD7Q9P2D1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.14■□□□□ 0.97
CHD7Q9P2D1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.14■□□□□ 0.97
CHD7Q9P2D1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHD7Q9P2D1 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CHD7Q9P2D1 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHD7Q9P2D1 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.13■□□□□ 0.97
CHD7Q9P2D1 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CHD7Q9P2D1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.13■□□□□ 0.97
CHD7Q9P2D1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHD7Q9P2D1 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHD7Q9P2D1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHD7Q9P2D1 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC21.13■□□□□ 0.97
CHD7Q9P2D1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHD7Q9P2D1 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.13■□□□□ 0.97
CHD7Q9P2D1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHD7Q9P2D1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CHD7Q9P2D1 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.13■□□□□ 0.97
CHD7Q9P2D1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.12■□□□□ 0.97
CHD7Q9P2D1 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD7Q9P2D1 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC21.12■□□□□ 0.97
CHD7Q9P2D1 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.12■□□□□ 0.97
CHD7Q9P2D1 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CHD7Q9P2D1 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.12■□□□□ 0.97
CHD7Q9P2D1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD7Q9P2D1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD7Q9P2D1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD7Q9P2D1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD7Q9P2D1 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD7Q9P2D1 AL024507.2-201ENST00000606070 2574 ntBASIC21.12■□□□□ 0.97
CHD7Q9P2D1 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.12■□□□□ 0.97
CHD7Q9P2D1 AC092338.2-201ENST00000568827 1415 ntBASIC21.12■□□□□ 0.97
CHD7Q9P2D1 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD7Q9P2D1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.12■□□□□ 0.97
CHD7Q9P2D1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHD7Q9P2D1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.12■□□□□ 0.97
CHD7Q9P2D1 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms