Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CUEDC1Q9NWM3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.2■□□□□ 0.66
CUEDC1Q9NWM3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
CUEDC1Q9NWM3 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CUEDC1Q9NWM3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.2■□□□□ 0.66
CUEDC1Q9NWM3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CUEDC1Q9NWM3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.2■□□□□ 0.66
CUEDC1Q9NWM3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CUEDC1Q9NWM3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CUEDC1Q9NWM3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CUEDC1Q9NWM3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CUEDC1Q9NWM3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CUEDC1Q9NWM3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CUEDC1Q9NWM3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.2■□□□□ 0.66
CUEDC1Q9NWM3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CUEDC1Q9NWM3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CUEDC1Q9NWM3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CUEDC1Q9NWM3 TCF3P1-201ENST00000423021 1937 ntBASIC19.19■□□□□ 0.66
CUEDC1Q9NWM3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CUEDC1Q9NWM3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CUEDC1Q9NWM3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CUEDC1Q9NWM3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CUEDC1Q9NWM3 AC124283.5-201ENST00000624661 1809 ntBASIC19.19■□□□□ 0.66
CUEDC1Q9NWM3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CUEDC1Q9NWM3 ESRRAP1-201ENST00000400596 1257 ntBASIC19.19■□□□□ 0.66
CUEDC1Q9NWM3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.19■□□□□ 0.66
CUEDC1Q9NWM3 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CUEDC1Q9NWM3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.19■□□□□ 0.66
CUEDC1Q9NWM3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CUEDC1Q9NWM3 AC142381.4-202ENST00000563973 229 ntBASIC19.19■□□□□ 0.66
CUEDC1Q9NWM3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.19■□□□□ 0.66
CUEDC1Q9NWM3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.19■□□□□ 0.66
CUEDC1Q9NWM3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.19■□□□□ 0.66
CUEDC1Q9NWM3 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CUEDC1Q9NWM3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CUEDC1Q9NWM3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CUEDC1Q9NWM3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
CUEDC1Q9NWM3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CUEDC1Q9NWM3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CUEDC1Q9NWM3 KRT16P6-202ENST00000425692 1426 ntBASIC19.18■□□□□ 0.66
CUEDC1Q9NWM3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CUEDC1Q9NWM3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
CUEDC1Q9NWM3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CUEDC1Q9NWM3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CUEDC1Q9NWM3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.18■□□□□ 0.66
CUEDC1Q9NWM3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CUEDC1Q9NWM3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.18■□□□□ 0.66
CUEDC1Q9NWM3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CUEDC1Q9NWM3 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CUEDC1Q9NWM3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CUEDC1Q9NWM3 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CUEDC1Q9NWM3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CUEDC1Q9NWM3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CUEDC1Q9NWM3 AL158047.1-201ENST00000445918 881 ntBASIC19.18■□□□□ 0.66
CUEDC1Q9NWM3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
CUEDC1Q9NWM3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.18■□□□□ 0.66
CUEDC1Q9NWM3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CUEDC1Q9NWM3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.18■□□□□ 0.66
CUEDC1Q9NWM3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CUEDC1Q9NWM3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CUEDC1Q9NWM3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CUEDC1Q9NWM3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.18■□□□□ 0.66
CUEDC1Q9NWM3 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CUEDC1Q9NWM3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CUEDC1Q9NWM3 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CUEDC1Q9NWM3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.18■□□□□ 0.66
CUEDC1Q9NWM3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CUEDC1Q9NWM3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CUEDC1Q9NWM3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
CUEDC1Q9NWM3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.18■□□□□ 0.66
CUEDC1Q9NWM3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CUEDC1Q9NWM3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CUEDC1Q9NWM3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.17■□□□□ 0.66
CUEDC1Q9NWM3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CUEDC1Q9NWM3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CUEDC1Q9NWM3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.17■□□□□ 0.66
CUEDC1Q9NWM3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CUEDC1Q9NWM3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CUEDC1Q9NWM3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CUEDC1Q9NWM3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CUEDC1Q9NWM3 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.17■□□□□ 0.66
CUEDC1Q9NWM3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.17■□□□□ 0.66
CUEDC1Q9NWM3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
CUEDC1Q9NWM3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.17■□□□□ 0.66
CUEDC1Q9NWM3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CUEDC1Q9NWM3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.17■□□□□ 0.66
CUEDC1Q9NWM3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CUEDC1Q9NWM3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CUEDC1Q9NWM3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CUEDC1Q9NWM3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CUEDC1Q9NWM3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CUEDC1Q9NWM3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.17■□□□□ 0.66
CUEDC1Q9NWM3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.17■□□□□ 0.66
CUEDC1Q9NWM3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CUEDC1Q9NWM3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CUEDC1Q9NWM3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CUEDC1Q9NWM3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CUEDC1Q9NWM3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.17■□□□□ 0.66
CUEDC1Q9NWM3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CUEDC1Q9NWM3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms