Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
SPTLC3Q9NUV7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
SPTLC3Q9NUV7 AL139246.5-201ENST00000606645 996 ntBASIC21.83■■□□□ 1.09
SPTLC3Q9NUV7 AC104187.1-201ENST00000607510 612 ntBASIC21.83■■□□□ 1.09
SPTLC3Q9NUV7 AC120498.10-201ENST00000621827 505 ntBASIC21.83■■□□□ 1.09
SPTLC3Q9NUV7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SPTLC3Q9NUV7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SPTLC3Q9NUV7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.83■■□□□ 1.08
SPTLC3Q9NUV7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC21.83■■□□□ 1.08
SPTLC3Q9NUV7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.08
SPTLC3Q9NUV7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
SPTLC3Q9NUV7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
SPTLC3Q9NUV7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SPTLC3Q9NUV7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.82■■□□□ 1.08
SPTLC3Q9NUV7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.82■■□□□ 1.08
SPTLC3Q9NUV7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SPTLC3Q9NUV7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SPTLC3Q9NUV7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.82■■□□□ 1.08
SPTLC3Q9NUV7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.82■■□□□ 1.08
SPTLC3Q9NUV7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.82■■□□□ 1.08
SPTLC3Q9NUV7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
SPTLC3Q9NUV7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SPTLC3Q9NUV7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SPTLC3Q9NUV7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SPTLC3Q9NUV7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
SPTLC3Q9NUV7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SPTLC3Q9NUV7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.82■■□□□ 1.08
SPTLC3Q9NUV7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
SPTLC3Q9NUV7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SPTLC3Q9NUV7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SPTLC3Q9NUV7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.81■■□□□ 1.08
SPTLC3Q9NUV7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPTLC3Q9NUV7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SPTLC3Q9NUV7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
SPTLC3Q9NUV7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
SPTLC3Q9NUV7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.81■■□□□ 1.08
SPTLC3Q9NUV7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SPTLC3Q9NUV7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPTLC3Q9NUV7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SPTLC3Q9NUV7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPTLC3Q9NUV7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPTLC3Q9NUV7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPTLC3Q9NUV7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.81■■□□□ 1.08
SPTLC3Q9NUV7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPTLC3Q9NUV7 AL133373.2-201ENST00000623187 2828 ntBASIC21.81■■□□□ 1.08
SPTLC3Q9NUV7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPTLC3Q9NUV7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPTLC3Q9NUV7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SPTLC3Q9NUV7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.8■■□□□ 1.08
SPTLC3Q9NUV7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SPTLC3Q9NUV7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SPTLC3Q9NUV7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.8■■□□□ 1.08
SPTLC3Q9NUV7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.8■■□□□ 1.08
SPTLC3Q9NUV7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.8■■□□□ 1.08
SPTLC3Q9NUV7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SPTLC3Q9NUV7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SPTLC3Q9NUV7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SPTLC3Q9NUV7 AC027612.3-201ENST00000413684 1047 ntBASIC21.8■■□□□ 1.08
SPTLC3Q9NUV7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.8■■□□□ 1.08
SPTLC3Q9NUV7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.8■■□□□ 1.08
SPTLC3Q9NUV7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
SPTLC3Q9NUV7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.8■■□□□ 1.08
SPTLC3Q9NUV7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SPTLC3Q9NUV7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.8■■□□□ 1.08
SPTLC3Q9NUV7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.8■■□□□ 1.08
SPTLC3Q9NUV7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
SPTLC3Q9NUV7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SPTLC3Q9NUV7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SPTLC3Q9NUV7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SPTLC3Q9NUV7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SPTLC3Q9NUV7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SPTLC3Q9NUV7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.79■■□□□ 1.08
SPTLC3Q9NUV7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SPTLC3Q9NUV7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SPTLC3Q9NUV7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.79■■□□□ 1.08
SPTLC3Q9NUV7 AC105265.2-201ENST00000467189 838 ntBASIC21.79■■□□□ 1.08
SPTLC3Q9NUV7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.79■■□□□ 1.08
SPTLC3Q9NUV7 DUX4L2-201ENST00000561772 1275 ntBASIC21.79■■□□□ 1.08
SPTLC3Q9NUV7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.79■■□□□ 1.08
SPTLC3Q9NUV7 AP001160.3-201ENST00000601484 763 ntBASIC21.79■■□□□ 1.08
SPTLC3Q9NUV7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.79■■□□□ 1.08
SPTLC3Q9NUV7 DUX4L6-201ENST00000626483 1275 ntBASIC21.79■■□□□ 1.08
SPTLC3Q9NUV7 DUX4L1-201ENST00000627662 1275 ntBASIC21.79■■□□□ 1.08
SPTLC3Q9NUV7 DUX4L8-201ENST00000629013 1275 ntBASIC21.79■■□□□ 1.08
SPTLC3Q9NUV7 DUX4L3-201ENST00000630187 1275 ntBASIC21.79■■□□□ 1.08
SPTLC3Q9NUV7 DUX4L7-201ENST00000630678 1275 ntBASIC21.79■■□□□ 1.08
SPTLC3Q9NUV7 DUX4L5-201ENST00000630834 1275 ntBASIC21.79■■□□□ 1.08
SPTLC3Q9NUV7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.79■■□□□ 1.08
SPTLC3Q9NUV7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.79■■□□□ 1.08
SPTLC3Q9NUV7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SPTLC3Q9NUV7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
SPTLC3Q9NUV7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SPTLC3Q9NUV7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SPTLC3Q9NUV7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC21.79■■□□□ 1.08
SPTLC3Q9NUV7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SPTLC3Q9NUV7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SPTLC3Q9NUV7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.78■■□□□ 1.08
SPTLC3Q9NUV7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SPTLC3Q9NUV7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.78■■□□□ 1.08
SPTLC3Q9NUV7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms