Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIN7CQ9NUP9 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIN7CQ9NUP9 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LIN7CQ9NUP9 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LIN7CQ9NUP9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIN7CQ9NUP9 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.47■□□□□ 0.23
LIN7CQ9NUP9 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
LIN7CQ9NUP9 AL691432.2-201ENST00000607222 2038 ntBASIC16.46■□□□□ 0.23
LIN7CQ9NUP9 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.46■□□□□ 0.23
LIN7CQ9NUP9 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LIN7CQ9NUP9 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
LIN7CQ9NUP9 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.46■□□□□ 0.23
LIN7CQ9NUP9 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
LIN7CQ9NUP9 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.46■□□□□ 0.23
LIN7CQ9NUP9 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
LIN7CQ9NUP9 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LIN7CQ9NUP9 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LIN7CQ9NUP9 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LIN7CQ9NUP9 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LIN7CQ9NUP9 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LIN7CQ9NUP9 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LIN7CQ9NUP9 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LIN7CQ9NUP9 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.46■□□□□ 0.23
LIN7CQ9NUP9 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.46■□□□□ 0.23
LIN7CQ9NUP9 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.46■□□□□ 0.23
LIN7CQ9NUP9 RAP2CP1-201ENST00000605103 478 ntBASIC16.46■□□□□ 0.23
LIN7CQ9NUP9 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.46■□□□□ 0.23
LIN7CQ9NUP9 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
LIN7CQ9NUP9 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LIN7CQ9NUP9 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LIN7CQ9NUP9 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.46■□□□□ 0.23
LIN7CQ9NUP9 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
LIN7CQ9NUP9 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
LIN7CQ9NUP9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.45■□□□□ 0.22
LIN7CQ9NUP9 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
LIN7CQ9NUP9 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LIN7CQ9NUP9 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LIN7CQ9NUP9 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LIN7CQ9NUP9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.45■□□□□ 0.22
LIN7CQ9NUP9 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LIN7CQ9NUP9 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.45■□□□□ 0.22
LIN7CQ9NUP9 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
LIN7CQ9NUP9 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LIN7CQ9NUP9 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
LIN7CQ9NUP9 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.45■□□□□ 0.22
LIN7CQ9NUP9 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LIN7CQ9NUP9 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.45■□□□□ 0.22
LIN7CQ9NUP9 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LIN7CQ9NUP9 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LIN7CQ9NUP9 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.45■□□□□ 0.22
LIN7CQ9NUP9 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.45■□□□□ 0.22
LIN7CQ9NUP9 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LIN7CQ9NUP9 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.45■□□□□ 0.22
LIN7CQ9NUP9 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LIN7CQ9NUP9 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LIN7CQ9NUP9 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LIN7CQ9NUP9 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LIN7CQ9NUP9 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
LIN7CQ9NUP9 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LIN7CQ9NUP9 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LIN7CQ9NUP9 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LIN7CQ9NUP9 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LIN7CQ9NUP9 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.44■□□□□ 0.22
LIN7CQ9NUP9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.44■□□□□ 0.22
LIN7CQ9NUP9 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
LIN7CQ9NUP9 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
LIN7CQ9NUP9 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LIN7CQ9NUP9 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LIN7CQ9NUP9 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LIN7CQ9NUP9 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LIN7CQ9NUP9 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.44■□□□□ 0.22
LIN7CQ9NUP9 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
LIN7CQ9NUP9 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.44■□□□□ 0.22
LIN7CQ9NUP9 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LIN7CQ9NUP9 AC005181.1-201ENST00000604782 1256 ntBASIC16.44■□□□□ 0.22
LIN7CQ9NUP9 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LIN7CQ9NUP9 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LIN7CQ9NUP9 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LIN7CQ9NUP9 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LIN7CQ9NUP9 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LIN7CQ9NUP9 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.44■□□□□ 0.22
LIN7CQ9NUP9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.44■□□□□ 0.22
LIN7CQ9NUP9 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LIN7CQ9NUP9 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LIN7CQ9NUP9 AC068338.2-201ENST00000563278 1430 ntBASIC16.44■□□□□ 0.22
LIN7CQ9NUP9 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.44■□□□□ 0.22
LIN7CQ9NUP9 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
LIN7CQ9NUP9 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.44■□□□□ 0.22
LIN7CQ9NUP9 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.44■□□□□ 0.22
LIN7CQ9NUP9 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LIN7CQ9NUP9 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LIN7CQ9NUP9 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
LIN7CQ9NUP9 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LIN7CQ9NUP9 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.43■□□□□ 0.22
LIN7CQ9NUP9 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LIN7CQ9NUP9 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.43■□□□□ 0.22
LIN7CQ9NUP9 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LIN7CQ9NUP9 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.43■□□□□ 0.22
LIN7CQ9NUP9 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LIN7CQ9NUP9 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms