Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.11■□□□□ 0.97
TLR9Q9NR96 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.11■□□□□ 0.97
TLR9Q9NR96 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
TLR9Q9NR96 LIN28AP1-201ENST00000429574 405 ntBASIC21.11■□□□□ 0.97
TLR9Q9NR96 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.11■□□□□ 0.97
TLR9Q9NR96 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.11■□□□□ 0.97
TLR9Q9NR96 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.11■□□□□ 0.97
TLR9Q9NR96 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.11■□□□□ 0.97
TLR9Q9NR96 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TLR9Q9NR96 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.11■□□□□ 0.97
TLR9Q9NR96 AL445675.2-201ENST00000620291 557 ntBASIC21.11■□□□□ 0.97
TLR9Q9NR96 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.11■□□□□ 0.97
TLR9Q9NR96 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
TLR9Q9NR96 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TLR9Q9NR96 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.11■□□□□ 0.97
TLR9Q9NR96 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TLR9Q9NR96 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
TLR9Q9NR96 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TLR9Q9NR96 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
TLR9Q9NR96 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TLR9Q9NR96 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TLR9Q9NR96 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TLR9Q9NR96 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TLR9Q9NR96 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.1■□□□□ 0.97
TLR9Q9NR96 MESTP1-201ENST00000404287 994 ntBASIC21.1■□□□□ 0.97
TLR9Q9NR96 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC21.1■□□□□ 0.97
TLR9Q9NR96 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
TLR9Q9NR96 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.1■□□□□ 0.97
TLR9Q9NR96 AC010203.1-204ENST00000548782 407 ntBASIC21.1■□□□□ 0.97
TLR9Q9NR96 AC087388.1-201ENST00000571370 1112 ntBASIC21.1■□□□□ 0.97
TLR9Q9NR96 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.1■□□□□ 0.97
TLR9Q9NR96 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.1■□□□□ 0.97
TLR9Q9NR96 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TLR9Q9NR96 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
TLR9Q9NR96 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TLR9Q9NR96 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TLR9Q9NR96 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TLR9Q9NR96 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TLR9Q9NR96 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TLR9Q9NR96 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TLR9Q9NR96 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TLR9Q9NR96 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TLR9Q9NR96 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.09■□□□□ 0.97
TLR9Q9NR96 ATP5G1P1-201ENST00000448724 379 ntBASIC21.09■□□□□ 0.97
TLR9Q9NR96 AP005242.2-201ENST00000580065 1175 ntBASIC21.09■□□□□ 0.97
TLR9Q9NR96 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
TLR9Q9NR96 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TLR9Q9NR96 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
TLR9Q9NR96 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TLR9Q9NR96 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TLR9Q9NR96 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.09■□□□□ 0.97
TLR9Q9NR96 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TLR9Q9NR96 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TLR9Q9NR96 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TLR9Q9NR96 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.09■□□□□ 0.97
TLR9Q9NR96 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TLR9Q9NR96 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
TLR9Q9NR96 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TLR9Q9NR96 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TLR9Q9NR96 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TLR9Q9NR96 DGCR10-201ENST00000609839 495 ntBASIC21.08■□□□□ 0.97
TLR9Q9NR96 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.08■□□□□ 0.97
TLR9Q9NR96 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.08■□□□□ 0.97
TLR9Q9NR96 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
TLR9Q9NR96 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
TLR9Q9NR96 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.08■□□□□ 0.96
TLR9Q9NR96 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
TLR9Q9NR96 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.08■□□□□ 0.96
TLR9Q9NR96 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.08■□□□□ 0.96
TLR9Q9NR96 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.08■□□□□ 0.96
TLR9Q9NR96 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TLR9Q9NR96 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.07■□□□□ 0.96
TLR9Q9NR96 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TLR9Q9NR96 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TLR9Q9NR96 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TLR9Q9NR96 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TLR9Q9NR96 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TLR9Q9NR96 B3GAT3P1-201ENST00000471720 806 ntBASIC21.07■□□□□ 0.96
TLR9Q9NR96 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.07■□□□□ 0.96
TLR9Q9NR96 EGLN1P1-201ENST00000531623 762 ntBASIC21.07■□□□□ 0.96
TLR9Q9NR96 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
TLR9Q9NR96 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TLR9Q9NR96 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
TLR9Q9NR96 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TLR9Q9NR96 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TLR9Q9NR96 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TLR9Q9NR96 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TLR9Q9NR96 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TLR9Q9NR96 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
TLR9Q9NR96 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TLR9Q9NR96 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TLR9Q9NR96 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TLR9Q9NR96 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.06■□□□□ 0.96
TLR9Q9NR96 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
TLR9Q9NR96 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.06■□□□□ 0.96
TLR9Q9NR96 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.06■□□□□ 0.96
TLR9Q9NR96 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TLR9Q9NR96 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
TLR9Q9NR96 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
TLR9Q9NR96 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms