Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.35■□□□□ 0.85
ATP13A1Q9HD20 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP13A1Q9HD20 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
ATP13A1Q9HD20 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP13A1Q9HD20 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
ATP13A1Q9HD20 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP13A1Q9HD20 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP13A1Q9HD20 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ATP13A1Q9HD20 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP13A1Q9HD20 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.35■□□□□ 0.85
ATP13A1Q9HD20 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP13A1Q9HD20 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
ATP13A1Q9HD20 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.35■□□□□ 0.85
ATP13A1Q9HD20 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.35■□□□□ 0.85
ATP13A1Q9HD20 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATP13A1Q9HD20 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP13A1Q9HD20 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATP13A1Q9HD20 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ATP13A1Q9HD20 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATP13A1Q9HD20 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATP13A1Q9HD20 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.34■□□□□ 0.85
ATP13A1Q9HD20 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.34■□□□□ 0.85
ATP13A1Q9HD20 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATP13A1Q9HD20 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.34■□□□□ 0.85
ATP13A1Q9HD20 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.34■□□□□ 0.85
ATP13A1Q9HD20 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATP13A1Q9HD20 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP13A1Q9HD20 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.34■□□□□ 0.85
ATP13A1Q9HD20 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATP13A1Q9HD20 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP13A1Q9HD20 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP13A1Q9HD20 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP13A1Q9HD20 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.34■□□□□ 0.85
ATP13A1Q9HD20 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP13A1Q9HD20 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.33■□□□□ 0.85
ATP13A1Q9HD20 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ATP13A1Q9HD20 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP13A1Q9HD20 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.33■□□□□ 0.85
ATP13A1Q9HD20 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP13A1Q9HD20 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP13A1Q9HD20 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP13A1Q9HD20 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.33■□□□□ 0.85
ATP13A1Q9HD20 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.33■□□□□ 0.85
ATP13A1Q9HD20 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ATP13A1Q9HD20 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.33■□□□□ 0.85
ATP13A1Q9HD20 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.33■□□□□ 0.85
ATP13A1Q9HD20 AL121906.2-201ENST00000621597 723 ntBASIC20.33■□□□□ 0.85
ATP13A1Q9HD20 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
ATP13A1Q9HD20 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATP13A1Q9HD20 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.33■□□□□ 0.84
ATP13A1Q9HD20 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.33■□□□□ 0.84
ATP13A1Q9HD20 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ATP13A1Q9HD20 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.33■□□□□ 0.84
ATP13A1Q9HD20 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATP13A1Q9HD20 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.33■□□□□ 0.84
ATP13A1Q9HD20 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.33■□□□□ 0.84
ATP13A1Q9HD20 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
ATP13A1Q9HD20 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP13A1Q9HD20 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
ATP13A1Q9HD20 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP13A1Q9HD20 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP13A1Q9HD20 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
ATP13A1Q9HD20 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP13A1Q9HD20 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP13A1Q9HD20 AL391422.3-201ENST00000603791 2761 ntBASIC20.32■□□□□ 0.84
ATP13A1Q9HD20 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
ATP13A1Q9HD20 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP13A1Q9HD20 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.32■□□□□ 0.84
ATP13A1Q9HD20 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATP13A1Q9HD20 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.32■□□□□ 0.84
ATP13A1Q9HD20 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.32■□□□□ 0.84
ATP13A1Q9HD20 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATP13A1Q9HD20 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.32■□□□□ 0.84
ATP13A1Q9HD20 RN7SL471P-201ENST00000580476 299 ntBASIC20.32■□□□□ 0.84
ATP13A1Q9HD20 MTDHP1-201ENST00000605323 784 ntBASIC20.32■□□□□ 0.84
ATP13A1Q9HD20 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP13A1Q9HD20 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP13A1Q9HD20 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATP13A1Q9HD20 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATP13A1Q9HD20 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
ATP13A1Q9HD20 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
ATP13A1Q9HD20 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATP13A1Q9HD20 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP13A1Q9HD20 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.31■□□□□ 0.84
ATP13A1Q9HD20 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.31■□□□□ 0.84
ATP13A1Q9HD20 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATP13A1Q9HD20 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP13A1Q9HD20 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP13A1Q9HD20 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
ATP13A1Q9HD20 AC098590.1-201ENST00000468126 897 ntBASIC20.31■□□□□ 0.84
ATP13A1Q9HD20 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
ATP13A1Q9HD20 C1QBPP2-201ENST00000528754 825 ntBASIC20.31■□□□□ 0.84
ATP13A1Q9HD20 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.31■□□□□ 0.84
ATP13A1Q9HD20 AL121829.2-201ENST00000620908 328 ntBASIC20.31■□□□□ 0.84
ATP13A1Q9HD20 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP13A1Q9HD20 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATP13A1Q9HD20 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP13A1Q9HD20 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.3■□□□□ 0.84
ATP13A1Q9HD20 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP13A1Q9HD20 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms