Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHD8Q9HCK8 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.6■□□□□ 0.57
CHD8Q9HCK8 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
CHD8Q9HCK8 AC244107.1-201ENST00000442033 332 ntBASIC18.6■□□□□ 0.57
CHD8Q9HCK8 AC079776.4-201ENST00000511039 504 ntBASIC18.6■□□□□ 0.57
CHD8Q9HCK8 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHD8Q9HCK8 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHD8Q9HCK8 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD8Q9HCK8 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.59■□□□□ 0.57
CHD8Q9HCK8 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CHD8Q9HCK8 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD8Q9HCK8 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD8Q9HCK8 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CHD8Q9HCK8 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD8Q9HCK8 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.59■□□□□ 0.57
CHD8Q9HCK8 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD8Q9HCK8 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD8Q9HCK8 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
CHD8Q9HCK8 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.59■□□□□ 0.57
CHD8Q9HCK8 AP002383.4-201ENST00000442518 975 ntBASIC18.59■□□□□ 0.57
CHD8Q9HCK8 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.59■□□□□ 0.57
CHD8Q9HCK8 KRT18P58-201ENST00000527480 1120 ntBASIC18.59■□□□□ 0.57
CHD8Q9HCK8 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.59■□□□□ 0.57
CHD8Q9HCK8 AC027796.2-201ENST00000575326 344 ntBASIC18.59■□□□□ 0.57
CHD8Q9HCK8 AC092329.2-201ENST00000598402 547 ntBASIC18.59■□□□□ 0.57
CHD8Q9HCK8 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHD8Q9HCK8 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHD8Q9HCK8 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHD8Q9HCK8 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHD8Q9HCK8 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHD8Q9HCK8 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.58■□□□□ 0.57
CHD8Q9HCK8 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHD8Q9HCK8 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHD8Q9HCK8 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.58■□□□□ 0.57
CHD8Q9HCK8 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.58■□□□□ 0.57
CHD8Q9HCK8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHD8Q9HCK8 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHD8Q9HCK8 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.58■□□□□ 0.56
CHD8Q9HCK8 ZNF444P1-201ENST00000559497 298 ntBASIC18.58■□□□□ 0.56
CHD8Q9HCK8 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.58■□□□□ 0.56
CHD8Q9HCK8 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHD8Q9HCK8 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHD8Q9HCK8 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHD8Q9HCK8 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHD8Q9HCK8 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.57■□□□□ 0.56
CHD8Q9HCK8 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.57■□□□□ 0.56
CHD8Q9HCK8 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.57■□□□□ 0.56
CHD8Q9HCK8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHD8Q9HCK8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHD8Q9HCK8 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHD8Q9HCK8 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD8Q9HCK8 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.57■□□□□ 0.56
CHD8Q9HCK8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD8Q9HCK8 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHD8Q9HCK8 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.57■□□□□ 0.56
CHD8Q9HCK8 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHD8Q9HCK8 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.57■□□□□ 0.56
CHD8Q9HCK8 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.57■□□□□ 0.56
CHD8Q9HCK8 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CHD8Q9HCK8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD8Q9HCK8 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD8Q9HCK8 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD8Q9HCK8 BX842568.4-201ENST00000421222 227 ntBASIC18.56■□□□□ 0.56
CHD8Q9HCK8 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.56■□□□□ 0.56
CHD8Q9HCK8 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.56■□□□□ 0.56
CHD8Q9HCK8 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.56■□□□□ 0.56
CHD8Q9HCK8 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD8Q9HCK8 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD8Q9HCK8 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.56■□□□□ 0.56
CHD8Q9HCK8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CHD8Q9HCK8 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD8Q9HCK8 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHD8Q9HCK8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD8Q9HCK8 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CHD8Q9HCK8 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CHD8Q9HCK8 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD8Q9HCK8 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CHD8Q9HCK8 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHD8Q9HCK8 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHD8Q9HCK8 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHD8Q9HCK8 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHD8Q9HCK8 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.55■□□□□ 0.56
CHD8Q9HCK8 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHD8Q9HCK8 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
CHD8Q9HCK8 AP000523.1-201ENST00000398242 1049 ntBASIC18.55■□□□□ 0.56
CHD8Q9HCK8 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHD8Q9HCK8 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHD8Q9HCK8 AL353719.1-201ENST00000566847 864 ntBASIC18.55■□□□□ 0.56
CHD8Q9HCK8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.55■□□□□ 0.56
CHD8Q9HCK8 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.55■□□□□ 0.56
CHD8Q9HCK8 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHD8Q9HCK8 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHD8Q9HCK8 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.55■□□□□ 0.56
CHD8Q9HCK8 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHD8Q9HCK8 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
CHD8Q9HCK8 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHD8Q9HCK8 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHD8Q9HCK8 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.55■□□□□ 0.56
CHD8Q9HCK8 KRT16P4-201ENST00000453883 522 ntBASIC18.55■□□□□ 0.56
CHD8Q9HCK8 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms