Protein–RNA interactions for Protein: Q9HCJ0

TNRC6C, Trinucleotide repeat-containing gene 6C protein, humanhuman

Known RBP Predictions only

Length 1,690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6CQ9HCJ0 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
TNRC6CQ9HCJ0 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC24.65■■□□□ 1.54
TNRC6CQ9HCJ0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC24.64■■□□□ 1.54
TNRC6CQ9HCJ0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
TNRC6CQ9HCJ0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
TNRC6CQ9HCJ0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC24.64■■□□□ 1.54
TNRC6CQ9HCJ0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC24.64■■□□□ 1.54
TNRC6CQ9HCJ0 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC24.64■■□□□ 1.53
TNRC6CQ9HCJ0 ECEL1P2-202ENST00000465689 757 ntBASIC24.64■■□□□ 1.53
TNRC6CQ9HCJ0 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
TNRC6CQ9HCJ0 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC24.64■■□□□ 1.53
TNRC6CQ9HCJ0 LINC01238-205ENST00000567549 1107 ntBASIC24.64■■□□□ 1.53
TNRC6CQ9HCJ0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC24.64■■□□□ 1.53
TNRC6CQ9HCJ0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC24.64■■□□□ 1.53
TNRC6CQ9HCJ0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
TNRC6CQ9HCJ0 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
TNRC6CQ9HCJ0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC24.64■■□□□ 1.53
TNRC6CQ9HCJ0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC24.64■■□□□ 1.53
TNRC6CQ9HCJ0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.53
TNRC6CQ9HCJ0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
TNRC6CQ9HCJ0 AP006587.1-201ENST00000534129 1502 ntBASIC24.64■■□□□ 1.53
TNRC6CQ9HCJ0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
TNRC6CQ9HCJ0 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC24.63■■□□□ 1.53
TNRC6CQ9HCJ0 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC24.63■■□□□ 1.53
TNRC6CQ9HCJ0 CLN6-221ENST00000637494 765 ntTSL 5 BASIC24.63■■□□□ 1.53
TNRC6CQ9HCJ0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TNRC6CQ9HCJ0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
TNRC6CQ9HCJ0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC24.63■■□□□ 1.53
TNRC6CQ9HCJ0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TNRC6CQ9HCJ0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TNRC6CQ9HCJ0 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC24.63■■□□□ 1.53
TNRC6CQ9HCJ0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
TNRC6CQ9HCJ0 INGX-201ENST00000359239 846 ntBASIC24.62■■□□□ 1.53
TNRC6CQ9HCJ0 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC24.62■■□□□ 1.53
TNRC6CQ9HCJ0 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TNRC6CQ9HCJ0 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TNRC6CQ9HCJ0 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TNRC6CQ9HCJ0 AC009947.2-201ENST00000444014 672 ntBASIC24.62■■□□□ 1.53
TNRC6CQ9HCJ0 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC24.62■■□□□ 1.53
TNRC6CQ9HCJ0 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC24.62■■□□□ 1.53
TNRC6CQ9HCJ0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC24.62■■□□□ 1.53
TNRC6CQ9HCJ0 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TNRC6CQ9HCJ0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC24.62■■□□□ 1.53
TNRC6CQ9HCJ0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC24.62■■□□□ 1.53
TNRC6CQ9HCJ0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC24.62■■□□□ 1.53
TNRC6CQ9HCJ0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TNRC6CQ9HCJ0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
TNRC6CQ9HCJ0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
TNRC6CQ9HCJ0 BID-212ENST00000614949 1988 ntTSL 5 BASIC24.62■■□□□ 1.53
TNRC6CQ9HCJ0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TNRC6CQ9HCJ0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC24.62■■□□□ 1.53
TNRC6CQ9HCJ0 AC063952.2-201ENST00000498792 1227 ntBASIC24.62■■□□□ 1.53
TNRC6CQ9HCJ0 KRT18P16-201ENST00000510337 1294 ntBASIC24.62■■□□□ 1.53
TNRC6CQ9HCJ0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC24.62■■□□□ 1.53
TNRC6CQ9HCJ0 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC24.62■■□□□ 1.53
TNRC6CQ9HCJ0 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC24.62■■□□□ 1.53
TNRC6CQ9HCJ0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC24.62■■□□□ 1.53
TNRC6CQ9HCJ0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC24.62■■□□□ 1.53
TNRC6CQ9HCJ0 FSCN1P1-201ENST00000568912 1481 ntBASIC24.62■■□□□ 1.53
TNRC6CQ9HCJ0 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TNRC6CQ9HCJ0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
TNRC6CQ9HCJ0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
TNRC6CQ9HCJ0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TNRC6CQ9HCJ0 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
TNRC6CQ9HCJ0 LIN28AP1-201ENST00000429574 405 ntBASIC24.61■■□□□ 1.53
TNRC6CQ9HCJ0 ISCU-203ENST00000431221 799 ntTSL 2 BASIC24.61■■□□□ 1.53
TNRC6CQ9HCJ0 LGALS8-AS1-201ENST00000487567 1457 ntBASIC24.61■■□□□ 1.53
TNRC6CQ9HCJ0 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
TNRC6CQ9HCJ0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TNRC6CQ9HCJ0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
TNRC6CQ9HCJ0 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
TNRC6CQ9HCJ0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC24.6■■□□□ 1.53
TNRC6CQ9HCJ0 AC018553.1-201ENST00000616682 1458 ntBASIC24.6■■□□□ 1.53
TNRC6CQ9HCJ0 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
TNRC6CQ9HCJ0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
TNRC6CQ9HCJ0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC24.6■■□□□ 1.53
TNRC6CQ9HCJ0 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC24.6■■□□□ 1.53
TNRC6CQ9HCJ0 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC24.6■■□□□ 1.53
TNRC6CQ9HCJ0 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
TNRC6CQ9HCJ0 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC24.6■■□□□ 1.53
TNRC6CQ9HCJ0 TFP1-202ENST00000475455 1573 ntBASIC24.6■■□□□ 1.53
TNRC6CQ9HCJ0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC24.6■■□□□ 1.53
TNRC6CQ9HCJ0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
TNRC6CQ9HCJ0 GUK1-204ENST00000366721 689 ntTSL 3 BASIC24.59■■□□□ 1.53
TNRC6CQ9HCJ0 AK4P3-201ENST00000418260 669 ntBASIC24.59■■□□□ 1.53
TNRC6CQ9HCJ0 AL450487.1-201ENST00000426799 995 ntBASIC24.59■■□□□ 1.53
TNRC6CQ9HCJ0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC24.59■■□□□ 1.53
TNRC6CQ9HCJ0 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC24.59■■□□□ 1.53
TNRC6CQ9HCJ0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
TNRC6CQ9HCJ0 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC24.59■■□□□ 1.53
TNRC6CQ9HCJ0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
TNRC6CQ9HCJ0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
TNRC6CQ9HCJ0 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
TNRC6CQ9HCJ0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC24.59■■□□□ 1.53
TNRC6CQ9HCJ0 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
TNRC6CQ9HCJ0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC24.59■■□□□ 1.53
TNRC6CQ9HCJ0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
TNRC6CQ9HCJ0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
TNRC6CQ9HCJ0 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC24.58■■□□□ 1.53
TNRC6CQ9HCJ0 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms