Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC25.04■■□□□ 1.6
CHMP4BQ9H444 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC25.04■■□□□ 1.6
CHMP4BQ9H444 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC25.04■■□□□ 1.6
CHMP4BQ9H444 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CHMP4BQ9H444 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CHMP4BQ9H444 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC25.04■■□□□ 1.6
CHMP4BQ9H444 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
CHMP4BQ9H444 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
CHMP4BQ9H444 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CHMP4BQ9H444 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC25.04■■□□□ 1.6
CHMP4BQ9H444 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC25.04■■□□□ 1.6
CHMP4BQ9H444 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CHMP4BQ9H444 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CHMP4BQ9H444 AFG3L1P-217ENST00000557444 2447 ntBASIC25.03■■□□□ 1.6
CHMP4BQ9H444 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC25.03■■□□□ 1.6
CHMP4BQ9H444 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CHMP4BQ9H444 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC25.03■■□□□ 1.6
CHMP4BQ9H444 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC25.03■■□□□ 1.6
CHMP4BQ9H444 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
CHMP4BQ9H444 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CHMP4BQ9H444 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
CHMP4BQ9H444 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CHMP4BQ9H444 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CHMP4BQ9H444 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CHMP4BQ9H444 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CHMP4BQ9H444 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CHMP4BQ9H444 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC25.02■■□□□ 1.6
CHMP4BQ9H444 RER1-204ENST00000378518 522 ntTSL 3 BASIC25.02■■□□□ 1.6
CHMP4BQ9H444 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC25.02■■□□□ 1.6
CHMP4BQ9H444 RHEB-204ENST00000472642 900 ntTSL 3 BASIC25.02■■□□□ 1.6
CHMP4BQ9H444 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
CHMP4BQ9H444 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CHMP4BQ9H444 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CHMP4BQ9H444 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
CHMP4BQ9H444 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CHMP4BQ9H444 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CHMP4BQ9H444 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC25.02■■□□□ 1.6
CHMP4BQ9H444 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CHMP4BQ9H444 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CHMP4BQ9H444 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
CHMP4BQ9H444 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CHMP4BQ9H444 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC25.01■■□□□ 1.59
CHMP4BQ9H444 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
CHMP4BQ9H444 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CHMP4BQ9H444 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC25.01■■□□□ 1.59
CHMP4BQ9H444 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC25.01■■□□□ 1.59
CHMP4BQ9H444 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC25.01■■□□□ 1.59
CHMP4BQ9H444 MYC-209ENST00000641252 345 ntBASIC25.01■■□□□ 1.59
CHMP4BQ9H444 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
CHMP4BQ9H444 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CHMP4BQ9H444 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC25.01■■□□□ 1.59
CHMP4BQ9H444 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CHMP4BQ9H444 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CHMP4BQ9H444 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC25.01■■□□□ 1.59
CHMP4BQ9H444 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC25.01■■□□□ 1.59
CHMP4BQ9H444 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
CHMP4BQ9H444 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC25■■□□□ 1.59
CHMP4BQ9H444 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
CHMP4BQ9H444 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC25■■□□□ 1.59
CHMP4BQ9H444 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC25■■□□□ 1.59
CHMP4BQ9H444 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC25■■□□□ 1.59
CHMP4BQ9H444 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
CHMP4BQ9H444 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CHMP4BQ9H444 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC25■■□□□ 1.59
CHMP4BQ9H444 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CHMP4BQ9H444 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CHMP4BQ9H444 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC25■■□□□ 1.59
CHMP4BQ9H444 BET1L-207ENST00000529614 560 ntTSL 5 BASIC25■■□□□ 1.59
CHMP4BQ9H444 MAX-217ENST00000557277 728 ntTSL 3 BASIC25■■□□□ 1.59
CHMP4BQ9H444 AL138781.1-201ENST00000566567 1274 ntBASIC25■■□□□ 1.59
CHMP4BQ9H444 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC25■■□□□ 1.59
CHMP4BQ9H444 GXYLT1P5-201ENST00000614548 1189 ntBASIC25■■□□□ 1.59
CHMP4BQ9H444 AL109923.1-201ENST00000618799 583 ntBASIC25■■□□□ 1.59
CHMP4BQ9H444 HLA-B-256ENST00000639848 1089 ntBASIC25■■□□□ 1.59
CHMP4BQ9H444 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CHMP4BQ9H444 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC25■■□□□ 1.59
CHMP4BQ9H444 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC25■■□□□ 1.59
CHMP4BQ9H444 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC25■■□□□ 1.59
CHMP4BQ9H444 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC25■■□□□ 1.59
CHMP4BQ9H444 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CHMP4BQ9H444 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CHMP4BQ9H444 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
CHMP4BQ9H444 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CHMP4BQ9H444 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CHMP4BQ9H444 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC24.99■■□□□ 1.59
CHMP4BQ9H444 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC24.99■■□□□ 1.59
CHMP4BQ9H444 AC133041.1-202ENST00000642053 222 ntBASIC24.99■■□□□ 1.59
CHMP4BQ9H444 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC24.98■■□□□ 1.59
CHMP4BQ9H444 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CHMP4BQ9H444 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
CHMP4BQ9H444 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC24.98■■□□□ 1.59
CHMP4BQ9H444 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC24.98■■□□□ 1.59
CHMP4BQ9H444 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
CHMP4BQ9H444 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CHMP4BQ9H444 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CHMP4BQ9H444 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC24.98■■□□□ 1.59
CHMP4BQ9H444 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CHMP4BQ9H444 CALM3-202ENST00000391918 702 ntTSL 2 BASIC24.98■■□□□ 1.59
CHMP4BQ9H444 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC24.98■■□□□ 1.59
CHMP4BQ9H444 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms