Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 AC004854.2-201ENST00000608450 1441 ntBASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 ADK-206ENST00000541550 2222 ntTSL 2 BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 AC007613.1-201ENST00000572811 2597 ntBASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-1Q9BYR8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 AC026471.1-201ENST00000564629 3026 ntBASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 NALT1-201ENST00000429224 738 ntTSL 5 BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC10.05□□□□□ -0.8
KRTAP3-1Q9BYR8 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 CYP21A1P-202ENST00000354927 1481 ntBASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 COX20-201ENST00000366528 568 ntTSL 2 BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 AC097381.1-201ENST00000429019 1296 ntBASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 KRT18P61-201ENST00000585825 1298 ntBASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-1Q9BYR8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC10.04□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms