Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 SKA1-204ENST00000488454 669 ntTSL 3 BASIC12.24□□□□□ -0.45
KRTAP3-3Q9BYR6 TRDMT1-210ENST00000488990 1301 ntTSL 2 BASIC12.24□□□□□ -0.45
KRTAP3-3Q9BYR6 SERPINB5-205ENST00000489441 1268 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
KRTAP3-3Q9BYR6 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC12.24□□□□□ -0.45
KRTAP3-3Q9BYR6 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC12.24□□□□□ -0.45
KRTAP3-3Q9BYR6 AC009927.1-201ENST00000510501 1779 ntBASIC12.24□□□□□ -0.45
KRTAP3-3Q9BYR6 IGKV2-4-201ENST00000523070 340 ntBASIC12.24□□□□□ -0.45
KRTAP3-3Q9BYR6 AC138356.3-201ENST00000523507 1228 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
KRTAP3-3Q9BYR6 MS4A6A-216ENST00000532169 1136 ntTSL 2 BASIC12.24□□□□□ -0.45
KRTAP3-3Q9BYR6 LINC00273-201ENST00000539813 1452 ntBASIC12.24□□□□□ -0.45
KRTAP3-3Q9BYR6 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
KRTAP3-3Q9BYR6 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC12.24□□□□□ -0.45
KRTAP3-3Q9BYR6 AGGF1P6-201ENST00000569213 976 ntBASIC12.24□□□□□ -0.45
KRTAP3-3Q9BYR6 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC12.24□□□□□ -0.45
KRTAP3-3Q9BYR6 AC127024.5-201ENST00000580085 462 ntBASIC12.24□□□□□ -0.45
KRTAP3-3Q9BYR6 AP006565.1-201ENST00000581117 586 ntTSL 2 BASIC12.24□□□□□ -0.45
KRTAP3-3Q9BYR6 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC12.24□□□□□ -0.45
KRTAP3-3Q9BYR6 AC104984.6-201ENST00000591928 360 ntTSL 3 BASIC12.24□□□□□ -0.45
KRTAP3-3Q9BYR6 MRPS35P3-201ENST00000603189 709 ntBASIC12.24□□□□□ -0.45
KRTAP3-3Q9BYR6 AL135786.2-201ENST00000608422 615 ntBASIC12.24□□□□□ -0.45
KRTAP3-3Q9BYR6 AC105105.4-201ENST00000610389 713 ntBASIC12.24□□□□□ -0.45
KRTAP3-3Q9BYR6 AC025253.1-201ENST00000613623 543 ntBASIC12.24□□□□□ -0.45
KRTAP3-3Q9BYR6 AC012313.9-201ENST00000619318 633 ntBASIC12.24□□□□□ -0.45
KRTAP3-3Q9BYR6 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.24□□□□□ -0.45
KRTAP3-3Q9BYR6 AP003499.2-201ENST00000624100 483 ntBASIC12.24□□□□□ -0.45
KRTAP3-3Q9BYR6 AL807742.1-201ENST00000636678 1160 ntTSL 5 BASIC12.24□□□□□ -0.45
KRTAP3-3Q9BYR6 NAP1L6-202ENST00000641404 1222 ntBASIC12.24□□□□□ -0.45
KRTAP3-3Q9BYR6 PKM-204ENST00000449901 2526 ntTSL 2 BASIC12.24□□□□□ -0.45
KRTAP3-3Q9BYR6 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 GLT8D2-202ENST00000546436 1578 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 LINC02287-201ENST00000555299 1384 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 C9orf85-201ENST00000334731 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 OR4C12-201ENST00000335238 1063 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 UBE2E1-203ENST00000424381 1224 ntTSL 2 BASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 MTND2P19-201ENST00000449129 1012 ntBASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 CTD-2270F17.1-201ENST00000518387 1215 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 AC083841.1-201ENST00000523657 670 ntTSL 2 BASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 AL133241.1-201ENST00000556832 487 ntBASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 AC084759.1-201ENST00000561168 290 ntBASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 AC022884.1-201ENST00000578490 577 ntTSL 4 BASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 AC005050.1-201ENST00000591803 550 ntTSL 4 BASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 BX322635.1-201ENST00000605804 496 ntBASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 AC097376.2-203ENST00000608663 431 ntTSL 3 BASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 AC096708.4-201ENST00000620563 552 ntBASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 MIR6090-201ENST00000622481 60 ntBASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 AC005252.2-201ENST00000624630 1141 ntBASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 SEPT14P19-203ENST00000633205 211 ntBASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 AC017104.5-201ENST00000637647 639 ntBASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 MFSD8-234ENST00000641503 1082 ntBASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KRTAP3-3Q9BYR6 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 E2F3P2-201ENST00000447755 1422 ntBASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 AL445248.1-201ENST00000366152 624 ntTSL 3 BASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 RAD51B-201ENST00000390683 922 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 OR2A42-201ENST00000391496 933 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 CNIH1-202ENST00000395573 1233 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 OR2A1-201ENST00000408951 933 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 STAT4-203ENST00000409995 709 ntTSL 5 BASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 BTF3L4P1-201ENST00000413813 468 ntBASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 RPL17P10-201ENST00000416091 555 ntBASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 AL360013.1-201ENST00000419031 858 ntBASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 AC106901.1-201ENST00000425086 698 ntBASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 RWDD4P2-201ENST00000426392 563 ntBASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 MTCO1P48-201ENST00000448024 1096 ntBASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 HLA-V-204ENST00000476601 1289 ntBASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms