Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.64■□□□□ 0.41
USB1Q9BQ65 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.64■□□□□ 0.41
USB1Q9BQ65 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.64■□□□□ 0.41
USB1Q9BQ65 RN7SL471P-201ENST00000580476 299 ntBASIC17.64■□□□□ 0.41
USB1Q9BQ65 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USB1Q9BQ65 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
USB1Q9BQ65 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
USB1Q9BQ65 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.64■□□□□ 0.41
USB1Q9BQ65 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USB1Q9BQ65 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.64■□□□□ 0.41
USB1Q9BQ65 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USB1Q9BQ65 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USB1Q9BQ65 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USB1Q9BQ65 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
USB1Q9BQ65 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USB1Q9BQ65 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USB1Q9BQ65 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
USB1Q9BQ65 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USB1Q9BQ65 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
USB1Q9BQ65 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
USB1Q9BQ65 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.63■□□□□ 0.41
USB1Q9BQ65 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
USB1Q9BQ65 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USB1Q9BQ65 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.63■□□□□ 0.41
USB1Q9BQ65 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USB1Q9BQ65 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.63■□□□□ 0.41
USB1Q9BQ65 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
USB1Q9BQ65 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
USB1Q9BQ65 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.63■□□□□ 0.41
USB1Q9BQ65 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USB1Q9BQ65 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USB1Q9BQ65 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
USB1Q9BQ65 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.63■□□□□ 0.41
USB1Q9BQ65 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USB1Q9BQ65 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
USB1Q9BQ65 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USB1Q9BQ65 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USB1Q9BQ65 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
USB1Q9BQ65 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USB1Q9BQ65 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USB1Q9BQ65 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USB1Q9BQ65 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
USB1Q9BQ65 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
USB1Q9BQ65 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
USB1Q9BQ65 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.62■□□□□ 0.41
USB1Q9BQ65 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
USB1Q9BQ65 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
USB1Q9BQ65 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USB1Q9BQ65 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
USB1Q9BQ65 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
USB1Q9BQ65 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USB1Q9BQ65 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
USB1Q9BQ65 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
USB1Q9BQ65 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
USB1Q9BQ65 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
USB1Q9BQ65 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USB1Q9BQ65 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
USB1Q9BQ65 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
USB1Q9BQ65 AC066615.1-201ENST00000640911 628 ntBASIC17.62■□□□□ 0.41
USB1Q9BQ65 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USB1Q9BQ65 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
USB1Q9BQ65 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
USB1Q9BQ65 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
USB1Q9BQ65 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.62■□□□□ 0.41
USB1Q9BQ65 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
USB1Q9BQ65 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.62■□□□□ 0.41
USB1Q9BQ65 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
USB1Q9BQ65 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
USB1Q9BQ65 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.61■□□□□ 0.41
USB1Q9BQ65 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
USB1Q9BQ65 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USB1Q9BQ65 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USB1Q9BQ65 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
USB1Q9BQ65 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.61■□□□□ 0.41
USB1Q9BQ65 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USB1Q9BQ65 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USB1Q9BQ65 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.61■□□□□ 0.41
USB1Q9BQ65 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.61■□□□□ 0.41
USB1Q9BQ65 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
USB1Q9BQ65 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.61■□□□□ 0.41
USB1Q9BQ65 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.61■□□□□ 0.41
USB1Q9BQ65 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
USB1Q9BQ65 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.61■□□□□ 0.41
USB1Q9BQ65 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.61■□□□□ 0.41
USB1Q9BQ65 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.61■□□□□ 0.41
USB1Q9BQ65 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.61■□□□□ 0.41
USB1Q9BQ65 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.61■□□□□ 0.41
USB1Q9BQ65 AC069544.1-201ENST00000609399 999 ntBASIC17.61■□□□□ 0.41
USB1Q9BQ65 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
USB1Q9BQ65 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.61■□□□□ 0.41
USB1Q9BQ65 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USB1Q9BQ65 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
USB1Q9BQ65 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USB1Q9BQ65 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.61■□□□□ 0.41
USB1Q9BQ65 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
USB1Q9BQ65 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USB1Q9BQ65 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
USB1Q9BQ65 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
USB1Q9BQ65 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USB1Q9BQ65 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms