Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SMOQ99835 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMOQ99835 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.87■□□□□ 0.93
SMOQ99835 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMOQ99835 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.87■□□□□ 0.93
SMOQ99835 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMOQ99835 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMOQ99835 LINC01521-201ENST00000504184 1943 ntBASIC20.87■□□□□ 0.93
SMOQ99835 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.87■□□□□ 0.93
SMOQ99835 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SMOQ99835 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.87■□□□□ 0.93
SMOQ99835 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.87■□□□□ 0.93
SMOQ99835 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.87■□□□□ 0.93
SMOQ99835 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.87■□□□□ 0.93
SMOQ99835 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.87■□□□□ 0.93
SMOQ99835 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.87■□□□□ 0.93
SMOQ99835 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.87■□□□□ 0.93
SMOQ99835 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMOQ99835 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMOQ99835 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.87■□□□□ 0.93
SMOQ99835 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMOQ99835 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMOQ99835 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SMOQ99835 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMOQ99835 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SMOQ99835 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMOQ99835 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMOQ99835 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
SMOQ99835 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.86■□□□□ 0.93
SMOQ99835 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
SMOQ99835 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.86■□□□□ 0.93
SMOQ99835 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.86■□□□□ 0.93
SMOQ99835 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMOQ99835 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMOQ99835 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.86■□□□□ 0.93
SMOQ99835 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.86■□□□□ 0.93
SMOQ99835 AC093827.2-201ENST00000512654 315 ntBASIC20.86■□□□□ 0.93
SMOQ99835 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.86■□□□□ 0.93
SMOQ99835 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMOQ99835 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMOQ99835 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMOQ99835 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.86■□□□□ 0.93
SMOQ99835 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMOQ99835 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SMOQ99835 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMOQ99835 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SMOQ99835 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMOQ99835 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMOQ99835 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMOQ99835 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMOQ99835 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
SMOQ99835 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.85■□□□□ 0.93
SMOQ99835 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
SMOQ99835 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMOQ99835 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMOQ99835 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMOQ99835 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.85■□□□□ 0.93
SMOQ99835 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
SMOQ99835 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMOQ99835 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMOQ99835 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMOQ99835 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.85■□□□□ 0.93
SMOQ99835 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMOQ99835 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.84■□□□□ 0.93
SMOQ99835 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMOQ99835 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMOQ99835 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.84■□□□□ 0.93
SMOQ99835 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMOQ99835 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.84■□□□□ 0.93
SMOQ99835 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SMOQ99835 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMOQ99835 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.84■□□□□ 0.93
SMOQ99835 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.84■□□□□ 0.93
SMOQ99835 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SMOQ99835 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.84■□□□□ 0.93
SMOQ99835 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMOQ99835 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SMOQ99835 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
SMOQ99835 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.83■□□□□ 0.93
SMOQ99835 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMOQ99835 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMOQ99835 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMOQ99835 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.83■□□□□ 0.93
SMOQ99835 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.83■□□□□ 0.93
SMOQ99835 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMOQ99835 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.83■□□□□ 0.93
SMOQ99835 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMOQ99835 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
SMOQ99835 AC008550.1-201ENST00000511500 884 ntBASIC20.83■□□□□ 0.93
SMOQ99835 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SMOQ99835 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SMOQ99835 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SMOQ99835 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SMOQ99835 AP006294.2-201ENST00000641667 209 ntBASIC20.83■□□□□ 0.93
SMOQ99835 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMOQ99835 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
SMOQ99835 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SMOQ99835 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.83■□□□□ 0.92
SMOQ99835 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
SMOQ99835 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms