Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.28■■□□□ 1
RAD9AQ99638 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAD9AQ99638 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.28■■□□□ 1
RAD9AQ99638 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAD9AQ99638 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.28■■□□□ 1
RAD9AQ99638 AL031133.1-201ENST00000406807 723 ntBASIC21.28■■□□□ 1
RAD9AQ99638 YBX1P10-201ENST00000444752 975 ntBASIC21.28■■□□□ 1
RAD9AQ99638 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.28■■□□□ 1
RAD9AQ99638 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.28■■□□□ 1
RAD9AQ99638 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.28■■□□□ 1
RAD9AQ99638 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.28■■□□□ 1
RAD9AQ99638 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.28■■□□□ 1
RAD9AQ99638 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.28■■□□□ 1
RAD9AQ99638 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.28■■□□□ 1
RAD9AQ99638 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAD9AQ99638 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.28■■□□□ 1
RAD9AQ99638 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
RAD9AQ99638 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAD9AQ99638 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.27■■□□□ 1
RAD9AQ99638 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
RAD9AQ99638 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAD9AQ99638 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.27■■□□□ 1
RAD9AQ99638 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
RAD9AQ99638 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAD9AQ99638 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAD9AQ99638 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.27■■□□□ 1
RAD9AQ99638 TUBB8P6-201ENST00000436895 1288 ntBASIC21.27■■□□□ 1
RAD9AQ99638 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.27■■□□□ 1
RAD9AQ99638 KRT18P16-201ENST00000510337 1294 ntBASIC21.27■■□□□ 1
RAD9AQ99638 AC139887.4-201ENST00000607877 719 ntBASIC21.27■■□□□ 1
RAD9AQ99638 AL138966.2-201ENST00000621997 464 ntBASIC21.27■■□□□ 1
RAD9AQ99638 AC116562.4-202ENST00000641738 218 ntBASIC21.27■■□□□ 1
RAD9AQ99638 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.27■■□□□ 1
RAD9AQ99638 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAD9AQ99638 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.27■■□□□ 1
RAD9AQ99638 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.27■■□□□ 1
RAD9AQ99638 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.27■■□□□ 1
RAD9AQ99638 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
RAD9AQ99638 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.27■□□□□ 0.99
RAD9AQ99638 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.27■□□□□ 0.99
RAD9AQ99638 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.27■□□□□ 0.99
RAD9AQ99638 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RAD9AQ99638 AC233723.2-201ENST00000623798 2106 ntBASIC21.26■□□□□ 0.99
RAD9AQ99638 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAD9AQ99638 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAD9AQ99638 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RAD9AQ99638 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAD9AQ99638 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAD9AQ99638 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.26■□□□□ 0.99
RAD9AQ99638 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RAD9AQ99638 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
RAD9AQ99638 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.26■□□□□ 0.99
RAD9AQ99638 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.26■□□□□ 0.99
RAD9AQ99638 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RAD9AQ99638 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAD9AQ99638 AC116351.2-201ENST00000606540 1585 ntBASIC21.26■□□□□ 0.99
RAD9AQ99638 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAD9AQ99638 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
RAD9AQ99638 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RAD9AQ99638 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAD9AQ99638 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RAD9AQ99638 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAD9AQ99638 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
RAD9AQ99638 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
RAD9AQ99638 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.25■□□□□ 0.99
RAD9AQ99638 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAD9AQ99638 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RAD9AQ99638 TFP1-202ENST00000475455 1573 ntBASIC21.25■□□□□ 0.99
RAD9AQ99638 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RAD9AQ99638 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RAD9AQ99638 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
RAD9AQ99638 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RAD9AQ99638 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.25■□□□□ 0.99
RAD9AQ99638 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RAD9AQ99638 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RAD9AQ99638 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAD9AQ99638 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAD9AQ99638 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAD9AQ99638 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAD9AQ99638 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAD9AQ99638 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAD9AQ99638 ECEL1P1-201ENST00000373592 1742 ntBASIC21.24■□□□□ 0.99
RAD9AQ99638 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAD9AQ99638 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAD9AQ99638 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAD9AQ99638 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.24■□□□□ 0.99
RAD9AQ99638 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
RAD9AQ99638 TSPY5P-201ENST00000426936 936 ntBASIC21.24■□□□□ 0.99
RAD9AQ99638 CCR12P-201ENST00000446203 998 ntBASIC21.24■□□□□ 0.99
RAD9AQ99638 KRT18P56-201ENST00000507275 550 ntBASIC21.24■□□□□ 0.99
RAD9AQ99638 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAD9AQ99638 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.24■□□□□ 0.99
RAD9AQ99638 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAD9AQ99638 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
RAD9AQ99638 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAD9AQ99638 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAD9AQ99638 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
RAD9AQ99638 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.24■□□□□ 0.99
RAD9AQ99638 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.24■□□□□ 0.99
RAD9AQ99638 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms