Protein–RNA interactions for Protein: Q99435

NELL2, Protein kinase C-binding protein NELL2, humanhuman

Predictions only

Length 816 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELL2Q99435 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
NELL2Q99435 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.21■□□□□ 0.83
NELL2Q99435 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.21■□□□□ 0.83
NELL2Q99435 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.21■□□□□ 0.83
NELL2Q99435 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.21■□□□□ 0.83
NELL2Q99435 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.21■□□□□ 0.83
NELL2Q99435 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NELL2Q99435 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NELL2Q99435 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NELL2Q99435 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
NELL2Q99435 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NELL2Q99435 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NELL2Q99435 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NELL2Q99435 ECEL1P2-202ENST00000465689 757 ntBASIC20.2■□□□□ 0.82
NELL2Q99435 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.2■□□□□ 0.82
NELL2Q99435 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
NELL2Q99435 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.2■□□□□ 0.82
NELL2Q99435 C1QL1P1-201ENST00000568105 661 ntBASIC20.2■□□□□ 0.82
NELL2Q99435 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.2■□□□□ 0.82
NELL2Q99435 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NELL2Q99435 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NELL2Q99435 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
NELL2Q99435 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.2■□□□□ 0.82
NELL2Q99435 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NELL2Q99435 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NELL2Q99435 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NELL2Q99435 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NELL2Q99435 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.2■□□□□ 0.82
NELL2Q99435 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
NELL2Q99435 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
NELL2Q99435 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
NELL2Q99435 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.19■□□□□ 0.82
NELL2Q99435 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NELL2Q99435 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NELL2Q99435 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.19■□□□□ 0.82
NELL2Q99435 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
NELL2Q99435 AL024507.2-201ENST00000606070 2574 ntBASIC20.19■□□□□ 0.82
NELL2Q99435 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.19■□□□□ 0.82
NELL2Q99435 AP006587.1-201ENST00000534129 1502 ntBASIC20.19■□□□□ 0.82
NELL2Q99435 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NELL2Q99435 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NELL2Q99435 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.19■□□□□ 0.82
NELL2Q99435 MESTP1-201ENST00000404287 994 ntBASIC20.19■□□□□ 0.82
NELL2Q99435 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.19■□□□□ 0.82
NELL2Q99435 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.19■□□□□ 0.82
NELL2Q99435 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
NELL2Q99435 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NELL2Q99435 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NELL2Q99435 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
NELL2Q99435 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NELL2Q99435 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
NELL2Q99435 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NELL2Q99435 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NELL2Q99435 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NELL2Q99435 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NELL2Q99435 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NELL2Q99435 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.18■□□□□ 0.82
NELL2Q99435 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.18■□□□□ 0.82
NELL2Q99435 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
NELL2Q99435 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.18■□□□□ 0.82
NELL2Q99435 PTBP1P-201ENST00000554374 1601 ntBASIC20.18■□□□□ 0.82
NELL2Q99435 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.18■□□□□ 0.82
NELL2Q99435 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NELL2Q99435 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NELL2Q99435 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NELL2Q99435 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NELL2Q99435 B3GAT3P1-201ENST00000471720 806 ntBASIC20.18■□□□□ 0.82
NELL2Q99435 AC063952.2-201ENST00000498792 1227 ntBASIC20.18■□□□□ 0.82
NELL2Q99435 AC097488.1-201ENST00000507834 756 ntBASIC20.18■□□□□ 0.82
NELL2Q99435 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.18■□□□□ 0.82
NELL2Q99435 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.18■□□□□ 0.82
NELL2Q99435 AC131212.4-201ENST00000623606 975 ntBASIC20.18■□□□□ 0.82
NELL2Q99435 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
NELL2Q99435 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NELL2Q99435 PKD1P6-201ENST00000343738 4769 ntBASIC20.18■□□□□ 0.82
NELL2Q99435 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NELL2Q99435 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
NELL2Q99435 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NELL2Q99435 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NELL2Q99435 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NELL2Q99435 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.17■□□□□ 0.82
NELL2Q99435 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.17■□□□□ 0.82
NELL2Q99435 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.17■□□□□ 0.82
NELL2Q99435 CRYGFP-201ENST00000418459 633 ntBASIC20.17■□□□□ 0.82
NELL2Q99435 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
NELL2Q99435 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NELL2Q99435 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NELL2Q99435 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
NELL2Q99435 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.17■□□□□ 0.82
NELL2Q99435 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NELL2Q99435 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NELL2Q99435 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
NELL2Q99435 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NELL2Q99435 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
NELL2Q99435 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.17■□□□□ 0.82
NELL2Q99435 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
NELL2Q99435 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.16■□□□□ 0.82
NELL2Q99435 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NELL2Q99435 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NELL2Q99435 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms