Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CSMD1Q96PZ7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSMD1Q96PZ7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
CSMD1Q96PZ7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.97■□□□□ 0.31
CSMD1Q96PZ7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.97■□□□□ 0.31
CSMD1Q96PZ7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSMD1Q96PZ7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSMD1Q96PZ7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSMD1Q96PZ7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CSMD1Q96PZ7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CSMD1Q96PZ7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.97■□□□□ 0.31
CSMD1Q96PZ7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CSMD1Q96PZ7 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CSMD1Q96PZ7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC16.97■□□□□ 0.31
CSMD1Q96PZ7 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CSMD1Q96PZ7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSMD1Q96PZ7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CSMD1Q96PZ7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSMD1Q96PZ7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSMD1Q96PZ7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.97■□□□□ 0.31
CSMD1Q96PZ7 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CSMD1Q96PZ7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.97■□□□□ 0.31
CSMD1Q96PZ7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CSMD1Q96PZ7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
CSMD1Q96PZ7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSMD1Q96PZ7 AC008622.2-201ENST00000617006 1229 ntBASIC16.96■□□□□ 0.31
CSMD1Q96PZ7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSMD1Q96PZ7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSMD1Q96PZ7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSMD1Q96PZ7 GUSBP5-202ENST00000510805 1989 ntBASIC16.96■□□□□ 0.31
CSMD1Q96PZ7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSMD1Q96PZ7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSMD1Q96PZ7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSMD1Q96PZ7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC16.96■□□□□ 0.31
CSMD1Q96PZ7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSMD1Q96PZ7 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.96■□□□□ 0.31
CSMD1Q96PZ7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.96■□□□□ 0.31
CSMD1Q96PZ7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CSMD1Q96PZ7 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSMD1Q96PZ7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CSMD1Q96PZ7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC16.96■□□□□ 0.31
CSMD1Q96PZ7 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.95■□□□□ 0.3
CSMD1Q96PZ7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSMD1Q96PZ7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.95■□□□□ 0.3
CSMD1Q96PZ7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSMD1Q96PZ7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSMD1Q96PZ7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CSMD1Q96PZ7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSMD1Q96PZ7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CSMD1Q96PZ7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSMD1Q96PZ7 COX11P1-201ENST00000489116 835 ntBASIC16.95■□□□□ 0.3
CSMD1Q96PZ7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.95■□□□□ 0.3
CSMD1Q96PZ7 AL445675.2-201ENST00000620291 557 ntBASIC16.95■□□□□ 0.3
CSMD1Q96PZ7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CSMD1Q96PZ7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CSMD1Q96PZ7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSMD1Q96PZ7 LINC00565-201ENST00000562710 2331 ntBASIC16.95■□□□□ 0.3
CSMD1Q96PZ7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CSMD1Q96PZ7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSMD1Q96PZ7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CSMD1Q96PZ7 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.95■□□□□ 0.3
CSMD1Q96PZ7 C2orf69P3-201ENST00000565542 1120 ntBASIC16.95■□□□□ 0.3
CSMD1Q96PZ7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.95■□□□□ 0.3
CSMD1Q96PZ7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
CSMD1Q96PZ7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CSMD1Q96PZ7 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSMD1Q96PZ7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CSMD1Q96PZ7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CSMD1Q96PZ7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.94■□□□□ 0.3
CSMD1Q96PZ7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.94■□□□□ 0.3
CSMD1Q96PZ7 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSMD1Q96PZ7 AL390719.1-204ENST00000412397 1219 ntBASIC16.94■□□□□ 0.3
CSMD1Q96PZ7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.94■□□□□ 0.3
CSMD1Q96PZ7 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
CSMD1Q96PZ7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.94■□□□□ 0.3
CSMD1Q96PZ7 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSMD1Q96PZ7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CSMD1Q96PZ7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSMD1Q96PZ7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.94■□□□□ 0.3
CSMD1Q96PZ7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSMD1Q96PZ7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.94■□□□□ 0.3
CSMD1Q96PZ7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSMD1Q96PZ7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
CSMD1Q96PZ7 FBXW4P1-201ENST00000426721 2239 ntBASIC16.94■□□□□ 0.3
CSMD1Q96PZ7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSMD1Q96PZ7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSMD1Q96PZ7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSMD1Q96PZ7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CSMD1Q96PZ7 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.94■□□□□ 0.3
CSMD1Q96PZ7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.94■□□□□ 0.3
CSMD1Q96PZ7 FSCN1P1-201ENST00000568912 1481 ntBASIC16.94■□□□□ 0.3
CSMD1Q96PZ7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.94■□□□□ 0.3
CSMD1Q96PZ7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CSMD1Q96PZ7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
CSMD1Q96PZ7 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSMD1Q96PZ7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSMD1Q96PZ7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSMD1Q96PZ7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSMD1Q96PZ7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSMD1Q96PZ7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms