Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CNTNAP3BQ96NU0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.99■□□□□ 0.63
CNTNAP3BQ96NU0 AC092119.3-201ENST00000612618 583 ntBASIC18.99■□□□□ 0.63
CNTNAP3BQ96NU0 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.99■□□□□ 0.63
CNTNAP3BQ96NU0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNTNAP3BQ96NU0 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNTNAP3BQ96NU0 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNTNAP3BQ96NU0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.98■□□□□ 0.63
CNTNAP3BQ96NU0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP3BQ96NU0 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP3BQ96NU0 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP3BQ96NU0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP3BQ96NU0 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP3BQ96NU0 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CNTNAP3BQ96NU0 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP3BQ96NU0 FAM220CP-201ENST00000395253 831 ntBASIC18.98■□□□□ 0.63
CNTNAP3BQ96NU0 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.98■□□□□ 0.63
CNTNAP3BQ96NU0 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP3BQ96NU0 AC079776.4-201ENST00000511039 504 ntBASIC18.98■□□□□ 0.63
CNTNAP3BQ96NU0 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP3BQ96NU0 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.98■□□□□ 0.63
CNTNAP3BQ96NU0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
CNTNAP3BQ96NU0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.98■□□□□ 0.63
CNTNAP3BQ96NU0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP3BQ96NU0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP3BQ96NU0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP3BQ96NU0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.98■□□□□ 0.63
CNTNAP3BQ96NU0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.98■□□□□ 0.63
CNTNAP3BQ96NU0 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.97■□□□□ 0.63
CNTNAP3BQ96NU0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNTNAP3BQ96NU0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CNTNAP3BQ96NU0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
CNTNAP3BQ96NU0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNTNAP3BQ96NU0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.97■□□□□ 0.63
CNTNAP3BQ96NU0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNTNAP3BQ96NU0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CNTNAP3BQ96NU0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.97■□□□□ 0.63
CNTNAP3BQ96NU0 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.97■□□□□ 0.63
CNTNAP3BQ96NU0 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNTNAP3BQ96NU0 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.97■□□□□ 0.63
CNTNAP3BQ96NU0 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CNTNAP3BQ96NU0 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.97■□□□□ 0.63
CNTNAP3BQ96NU0 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.97■□□□□ 0.63
CNTNAP3BQ96NU0 AL136038.3-201ENST00000561909 1096 ntBASIC18.97■□□□□ 0.63
CNTNAP3BQ96NU0 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNTNAP3BQ96NU0 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.97■□□□□ 0.63
CNTNAP3BQ96NU0 AL031985.4-201ENST00000642138 673 ntBASIC18.97■□□□□ 0.63
CNTNAP3BQ96NU0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.97■□□□□ 0.63
CNTNAP3BQ96NU0 AC124283.5-201ENST00000624661 1809 ntBASIC18.97■□□□□ 0.63
CNTNAP3BQ96NU0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CNTNAP3BQ96NU0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNTNAP3BQ96NU0 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNTNAP3BQ96NU0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNTNAP3BQ96NU0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNTNAP3BQ96NU0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNTNAP3BQ96NU0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNTNAP3BQ96NU0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
CNTNAP3BQ96NU0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.96■□□□□ 0.63
CNTNAP3BQ96NU0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
CNTNAP3BQ96NU0 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNTNAP3BQ96NU0 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CNTNAP3BQ96NU0 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CNTNAP3BQ96NU0 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CNTNAP3BQ96NU0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.96■□□□□ 0.63
CNTNAP3BQ96NU0 AC097488.1-201ENST00000507834 756 ntBASIC18.96■□□□□ 0.63
CNTNAP3BQ96NU0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
CNTNAP3BQ96NU0 AC141257.4-201ENST00000634557 245 ntBASIC18.96■□□□□ 0.63
CNTNAP3BQ96NU0 AC136944.6-201ENST00000634818 245 ntBASIC18.96■□□□□ 0.63
CNTNAP3BQ96NU0 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNTNAP3BQ96NU0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNTNAP3BQ96NU0 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNTNAP3BQ96NU0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.96■□□□□ 0.63
CNTNAP3BQ96NU0 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.96■□□□□ 0.63
CNTNAP3BQ96NU0 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNTNAP3BQ96NU0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNTNAP3BQ96NU0 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.62
CNTNAP3BQ96NU0 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNTNAP3BQ96NU0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.95■□□□□ 0.62
CNTNAP3BQ96NU0 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNTNAP3BQ96NU0 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNTNAP3BQ96NU0 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNTNAP3BQ96NU0 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.95■□□□□ 0.62
CNTNAP3BQ96NU0 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.95■□□□□ 0.62
CNTNAP3BQ96NU0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
CNTNAP3BQ96NU0 AL031008.1-201ENST00000619963 541 ntBASIC18.95■□□□□ 0.62
CNTNAP3BQ96NU0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNTNAP3BQ96NU0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CNTNAP3BQ96NU0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNTNAP3BQ96NU0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.94■□□□□ 0.62
CNTNAP3BQ96NU0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.94■□□□□ 0.62
CNTNAP3BQ96NU0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.94■□□□□ 0.62
CNTNAP3BQ96NU0 AC137767.1-201ENST00000602918 1920 ntBASIC18.94■□□□□ 0.62
CNTNAP3BQ96NU0 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNTNAP3BQ96NU0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CNTNAP3BQ96NU0 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNTNAP3BQ96NU0 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNTNAP3BQ96NU0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.94■□□□□ 0.62
CNTNAP3BQ96NU0 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CNTNAP3BQ96NU0 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.94■□□□□ 0.62
CNTNAP3BQ96NU0 AL355385.1-201ENST00000606123 409 ntBASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms