Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SLC46A1Q96NT5 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC46A1Q96NT5 KRT18P22-201ENST00000402024 1347 ntBASIC19.01■□□□□ 0.63
SLC46A1Q96NT5 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC46A1Q96NT5 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC46A1Q96NT5 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC46A1Q96NT5 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC46A1Q96NT5 KRT8P36-201ENST00000489121 1440 ntBASIC19.01■□□□□ 0.63
SLC46A1Q96NT5 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.01■□□□□ 0.63
SLC46A1Q96NT5 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC46A1Q96NT5 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC46A1Q96NT5 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC46A1Q96NT5 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SLC46A1Q96NT5 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC46A1Q96NT5 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC46A1Q96NT5 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC46A1Q96NT5 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC46A1Q96NT5 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.01■□□□□ 0.63
SLC46A1Q96NT5 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.01■□□□□ 0.63
SLC46A1Q96NT5 NAPSB-206ENST00000562112 1266 ntBASIC19.01■□□□□ 0.63
SLC46A1Q96NT5 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.01■□□□□ 0.63
SLC46A1Q96NT5 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.01■□□□□ 0.63
SLC46A1Q96NT5 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
SLC46A1Q96NT5 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC46A1Q96NT5 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC46A1Q96NT5 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
SLC46A1Q96NT5 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19■□□□□ 0.63
SLC46A1Q96NT5 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC46A1Q96NT5 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC46A1Q96NT5 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC46A1Q96NT5 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC46A1Q96NT5 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC46A1Q96NT5 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19■□□□□ 0.63
SLC46A1Q96NT5 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC46A1Q96NT5 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19■□□□□ 0.63
SLC46A1Q96NT5 AC116562.2-201ENST00000507042 360 ntBASIC19■□□□□ 0.63
SLC46A1Q96NT5 DUT-205ENST00000558813 769 ntTSL 2 BASIC19■□□□□ 0.63
SLC46A1Q96NT5 FITM1-202ENST00000559294 800 ntBASIC19■□□□□ 0.63
SLC46A1Q96NT5 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19■□□□□ 0.63
SLC46A1Q96NT5 MIR2861-201ENST00000636310 90 ntBASIC19■□□□□ 0.63
SLC46A1Q96NT5 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19■□□□□ 0.63
SLC46A1Q96NT5 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC46A1Q96NT5 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC46A1Q96NT5 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
SLC46A1Q96NT5 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC46A1Q96NT5 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SLC46A1Q96NT5 CYP2D8P-201ENST00000433633 1490 ntBASIC18.99■□□□□ 0.63
SLC46A1Q96NT5 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC46A1Q96NT5 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC46A1Q96NT5 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC46A1Q96NT5 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.99■□□□□ 0.63
SLC46A1Q96NT5 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC46A1Q96NT5 AL137013.1-201ENST00000432946 1228 ntBASIC18.99■□□□□ 0.63
SLC46A1Q96NT5 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.99■□□□□ 0.63
SLC46A1Q96NT5 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC46A1Q96NT5 KSR1P1-201ENST00000446298 240 ntBASIC18.99■□□□□ 0.63
SLC46A1Q96NT5 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC46A1Q96NT5 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.99■□□□□ 0.63
SLC46A1Q96NT5 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC46A1Q96NT5 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC46A1Q96NT5 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC46A1Q96NT5 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC46A1Q96NT5 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC46A1Q96NT5 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SLC46A1Q96NT5 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC46A1Q96NT5 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC46A1Q96NT5 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC46A1Q96NT5 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC46A1Q96NT5 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC46A1Q96NT5 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.98■□□□□ 0.63
SLC46A1Q96NT5 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC46A1Q96NT5 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SLC46A1Q96NT5 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SLC46A1Q96NT5 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC46A1Q96NT5 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
SLC46A1Q96NT5 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SLC46A1Q96NT5 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.98■□□□□ 0.63
SLC46A1Q96NT5 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC46A1Q96NT5 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC46A1Q96NT5 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.98■□□□□ 0.63
SLC46A1Q96NT5 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.98■□□□□ 0.63
SLC46A1Q96NT5 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC46A1Q96NT5 CR392000.1-201ENST00000624770 1228 ntBASIC18.98■□□□□ 0.63
SLC46A1Q96NT5 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC46A1Q96NT5 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC46A1Q96NT5 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.98■□□□□ 0.63
SLC46A1Q96NT5 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC46A1Q96NT5 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC46A1Q96NT5 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC46A1Q96NT5 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC46A1Q96NT5 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLC46A1Q96NT5 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC46A1Q96NT5 TERF1P1-201ENST00000311003 1181 ntBASIC18.97■□□□□ 0.63
SLC46A1Q96NT5 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.97■□□□□ 0.63
SLC46A1Q96NT5 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.97■□□□□ 0.63
SLC46A1Q96NT5 KRT18P57-201ENST00000443599 1254 ntBASIC18.97■□□□□ 0.63
SLC46A1Q96NT5 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SLC46A1Q96NT5 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.97■□□□□ 0.63
SLC46A1Q96NT5 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.97■□□□□ 0.63
SLC46A1Q96NT5 AC010947.1-201ENST00000623454 693 ntBASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms