Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
ZNF48Q96MX3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF48Q96MX3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.16■□□□□ 0.18
ZNF48Q96MX3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
ZNF48Q96MX3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF48Q96MX3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.16■□□□□ 0.18
ZNF48Q96MX3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.16■□□□□ 0.18
ZNF48Q96MX3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.16■□□□□ 0.18
ZNF48Q96MX3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.16■□□□□ 0.18
ZNF48Q96MX3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.16■□□□□ 0.18
ZNF48Q96MX3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.16■□□□□ 0.18
ZNF48Q96MX3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
ZNF48Q96MX3 FEM1AP1-201ENST00000431297 1995 ntBASIC16.16■□□□□ 0.18
ZNF48Q96MX3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF48Q96MX3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF48Q96MX3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF48Q96MX3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF48Q96MX3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF48Q96MX3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF48Q96MX3 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.16■□□□□ 0.18
ZNF48Q96MX3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF48Q96MX3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF48Q96MX3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
ZNF48Q96MX3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF48Q96MX3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ZNF48Q96MX3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ZNF48Q96MX3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF48Q96MX3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF48Q96MX3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF48Q96MX3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF48Q96MX3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF48Q96MX3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF48Q96MX3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF48Q96MX3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF48Q96MX3 AC087499.1-201ENST00000418141 1075 ntBASIC16.15■□□□□ 0.18
ZNF48Q96MX3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.15■□□□□ 0.18
ZNF48Q96MX3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF48Q96MX3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.15■□□□□ 0.18
ZNF48Q96MX3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF48Q96MX3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.15■□□□□ 0.18
ZNF48Q96MX3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF48Q96MX3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF48Q96MX3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.15■□□□□ 0.18
ZNF48Q96MX3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.15■□□□□ 0.18
ZNF48Q96MX3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF48Q96MX3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF48Q96MX3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.15■□□□□ 0.18
ZNF48Q96MX3 GABARAPL3-202ENST00000624044 1851 ntBASIC16.15■□□□□ 0.18
ZNF48Q96MX3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF48Q96MX3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF48Q96MX3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF48Q96MX3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF48Q96MX3 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ZNF48Q96MX3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
ZNF48Q96MX3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF48Q96MX3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF48Q96MX3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
ZNF48Q96MX3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF48Q96MX3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF48Q96MX3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ZNF48Q96MX3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF48Q96MX3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF48Q96MX3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF48Q96MX3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.14■□□□□ 0.17
ZNF48Q96MX3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF48Q96MX3 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.14■□□□□ 0.17
ZNF48Q96MX3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.14■□□□□ 0.17
ZNF48Q96MX3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.14■□□□□ 0.17
ZNF48Q96MX3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.14■□□□□ 0.17
ZNF48Q96MX3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.14■□□□□ 0.17
ZNF48Q96MX3 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.14■□□□□ 0.17
ZNF48Q96MX3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.14■□□□□ 0.17
ZNF48Q96MX3 AC133561.5-201ENST00000635547 218 ntBASIC16.14■□□□□ 0.17
ZNF48Q96MX3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF48Q96MX3 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF48Q96MX3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.14■□□□□ 0.17
ZNF48Q96MX3 NBPF21P-201ENST00000425093 1451 ntBASIC16.14■□□□□ 0.17
ZNF48Q96MX3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF48Q96MX3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF48Q96MX3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ZNF48Q96MX3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF48Q96MX3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF48Q96MX3 HTR7P1-201ENST00000538670 1336 ntBASIC16.14■□□□□ 0.17
ZNF48Q96MX3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.14■□□□□ 0.17
ZNF48Q96MX3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF48Q96MX3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF48Q96MX3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF48Q96MX3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.13■□□□□ 0.17
ZNF48Q96MX3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ZNF48Q96MX3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
ZNF48Q96MX3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.13■□□□□ 0.17
ZNF48Q96MX3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF48Q96MX3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF48Q96MX3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.13■□□□□ 0.17
ZNF48Q96MX3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.13■□□□□ 0.17
ZNF48Q96MX3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.13■□□□□ 0.17
ZNF48Q96MX3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
ZNF48Q96MX3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
ZNF48Q96MX3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
ZNF48Q96MX3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms