Protein–RNA interactions for Protein: Q96CW5

TUBGCP3, Gamma-tubulin complex component 3, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3Q96CW5 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TUBGCP3Q96CW5 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TUBGCP3Q96CW5 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.23■□□□□ 0.67
TUBGCP3Q96CW5 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TUBGCP3Q96CW5 AC009237.14-201ENST00000609975 1594 ntBASIC19.23■□□□□ 0.67
TUBGCP3Q96CW5 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TUBGCP3Q96CW5 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TUBGCP3Q96CW5 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.23■□□□□ 0.67
TUBGCP3Q96CW5 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TUBGCP3Q96CW5 AL162412.1-201ENST00000567129 965 ntBASIC19.23■□□□□ 0.67
TUBGCP3Q96CW5 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TUBGCP3Q96CW5 AC013268.1-206ENST00000638368 961 ntBASIC19.23■□□□□ 0.67
TUBGCP3Q96CW5 AC112229.1-201ENST00000639295 961 ntBASIC19.23■□□□□ 0.67
TUBGCP3Q96CW5 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TUBGCP3Q96CW5 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.23■□□□□ 0.67
TUBGCP3Q96CW5 KRT8P17-201ENST00000453110 1448 ntBASIC19.23■□□□□ 0.67
TUBGCP3Q96CW5 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TUBGCP3Q96CW5 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TUBGCP3Q96CW5 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TUBGCP3Q96CW5 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TUBGCP3Q96CW5 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TUBGCP3Q96CW5 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TUBGCP3Q96CW5 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.22■□□□□ 0.67
TUBGCP3Q96CW5 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TUBGCP3Q96CW5 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TUBGCP3Q96CW5 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TUBGCP3Q96CW5 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TUBGCP3Q96CW5 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TUBGCP3Q96CW5 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TUBGCP3Q96CW5 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TUBGCP3Q96CW5 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TUBGCP3Q96CW5 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TUBGCP3Q96CW5 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TUBGCP3Q96CW5 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TUBGCP3Q96CW5 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TUBGCP3Q96CW5 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TUBGCP3Q96CW5 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.22■□□□□ 0.67
TUBGCP3Q96CW5 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TUBGCP3Q96CW5 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TUBGCP3Q96CW5 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TUBGCP3Q96CW5 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TUBGCP3Q96CW5 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TUBGCP3Q96CW5 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TUBGCP3Q96CW5 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TUBGCP3Q96CW5 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TUBGCP3Q96CW5 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TUBGCP3Q96CW5 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TUBGCP3Q96CW5 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TUBGCP3Q96CW5 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
TUBGCP3Q96CW5 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TUBGCP3Q96CW5 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TUBGCP3Q96CW5 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TUBGCP3Q96CW5 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.21■□□□□ 0.67
TUBGCP3Q96CW5 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TUBGCP3Q96CW5 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TUBGCP3Q96CW5 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TUBGCP3Q96CW5 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TUBGCP3Q96CW5 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TUBGCP3Q96CW5 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TUBGCP3Q96CW5 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TUBGCP3Q96CW5 KRT16P6-202ENST00000425692 1426 ntBASIC19.21■□□□□ 0.67
TUBGCP3Q96CW5 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TUBGCP3Q96CW5 AC007322.4-201ENST00000509611 723 ntBASIC19.21■□□□□ 0.67
TUBGCP3Q96CW5 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
TUBGCP3Q96CW5 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.21■□□□□ 0.67
TUBGCP3Q96CW5 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TUBGCP3Q96CW5 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TUBGCP3Q96CW5 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TUBGCP3Q96CW5 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TUBGCP3Q96CW5 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TUBGCP3Q96CW5 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TUBGCP3Q96CW5 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TUBGCP3Q96CW5 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.66
TUBGCP3Q96CW5 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TUBGCP3Q96CW5 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TUBGCP3Q96CW5 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.2■□□□□ 0.66
TUBGCP3Q96CW5 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TUBGCP3Q96CW5 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.2■□□□□ 0.66
TUBGCP3Q96CW5 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TUBGCP3Q96CW5 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TUBGCP3Q96CW5 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.2■□□□□ 0.66
TUBGCP3Q96CW5 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TUBGCP3Q96CW5 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.2■□□□□ 0.66
TUBGCP3Q96CW5 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.2■□□□□ 0.66
TUBGCP3Q96CW5 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
TUBGCP3Q96CW5 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TUBGCP3Q96CW5 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TUBGCP3Q96CW5 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBGCP3Q96CW5 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.19■□□□□ 0.66
TUBGCP3Q96CW5 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TUBGCP3Q96CW5 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TUBGCP3Q96CW5 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.19■□□□□ 0.66
TUBGCP3Q96CW5 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBGCP3Q96CW5 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TUBGCP3Q96CW5 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TUBGCP3Q96CW5 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.19■□□□□ 0.66
TUBGCP3Q96CW5 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBGCP3Q96CW5 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBGCP3Q96CW5 MCRIP2P1-201ENST00000394346 511 ntBASIC19.19■□□□□ 0.66
TUBGCP3Q96CW5 KRT18P11-201ENST00000435214 1283 ntBASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms