Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CTHRC1Q96CG8 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTHRC1Q96CG8 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CTHRC1Q96CG8 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CTHRC1Q96CG8 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTHRC1Q96CG8 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CTHRC1Q96CG8 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTHRC1Q96CG8 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.43■□□□□ 0.54
CTHRC1Q96CG8 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTHRC1Q96CG8 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CTHRC1Q96CG8 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTHRC1Q96CG8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.43■□□□□ 0.54
CTHRC1Q96CG8 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.43■□□□□ 0.54
CTHRC1Q96CG8 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
CTHRC1Q96CG8 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.43■□□□□ 0.54
CTHRC1Q96CG8 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.43■□□□□ 0.54
CTHRC1Q96CG8 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.43■□□□□ 0.54
CTHRC1Q96CG8 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.43■□□□□ 0.54
CTHRC1Q96CG8 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.43■□□□□ 0.54
CTHRC1Q96CG8 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTHRC1Q96CG8 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.43■□□□□ 0.54
CTHRC1Q96CG8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CTHRC1Q96CG8 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTHRC1Q96CG8 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.43■□□□□ 0.54
CTHRC1Q96CG8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.43■□□□□ 0.54
CTHRC1Q96CG8 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CTHRC1Q96CG8 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTHRC1Q96CG8 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CTHRC1Q96CG8 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.42■□□□□ 0.54
CTHRC1Q96CG8 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTHRC1Q96CG8 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CTHRC1Q96CG8 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTHRC1Q96CG8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.42■□□□□ 0.54
CTHRC1Q96CG8 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CTHRC1Q96CG8 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CTHRC1Q96CG8 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.42■□□□□ 0.54
CTHRC1Q96CG8 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.42■□□□□ 0.54
CTHRC1Q96CG8 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CTHRC1Q96CG8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CTHRC1Q96CG8 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.42■□□□□ 0.54
CTHRC1Q96CG8 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CTHRC1Q96CG8 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CTHRC1Q96CG8 AL121829.2-201ENST00000620908 328 ntBASIC18.42■□□□□ 0.54
CTHRC1Q96CG8 AL121906.2-201ENST00000621597 723 ntBASIC18.42■□□□□ 0.54
CTHRC1Q96CG8 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.42■□□□□ 0.54
CTHRC1Q96CG8 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.42■□□□□ 0.54
CTHRC1Q96CG8 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.42■□□□□ 0.54
CTHRC1Q96CG8 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTHRC1Q96CG8 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.42■□□□□ 0.54
CTHRC1Q96CG8 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CTHRC1Q96CG8 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CTHRC1Q96CG8 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CTHRC1Q96CG8 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTHRC1Q96CG8 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.41■□□□□ 0.54
CTHRC1Q96CG8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTHRC1Q96CG8 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTHRC1Q96CG8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTHRC1Q96CG8 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.41■□□□□ 0.54
CTHRC1Q96CG8 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.41■□□□□ 0.54
CTHRC1Q96CG8 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTHRC1Q96CG8 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CTHRC1Q96CG8 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CTHRC1Q96CG8 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CTHRC1Q96CG8 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.41■□□□□ 0.54
CTHRC1Q96CG8 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTHRC1Q96CG8 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CTHRC1Q96CG8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CTHRC1Q96CG8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTHRC1Q96CG8 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.41■□□□□ 0.54
CTHRC1Q96CG8 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.41■□□□□ 0.54
CTHRC1Q96CG8 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CTHRC1Q96CG8 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTHRC1Q96CG8 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.41■□□□□ 0.54
CTHRC1Q96CG8 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.41■□□□□ 0.54
CTHRC1Q96CG8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTHRC1Q96CG8 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTHRC1Q96CG8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTHRC1Q96CG8 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CTHRC1Q96CG8 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTHRC1Q96CG8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTHRC1Q96CG8 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CTHRC1Q96CG8 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CTHRC1Q96CG8 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTHRC1Q96CG8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTHRC1Q96CG8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTHRC1Q96CG8 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CTHRC1Q96CG8 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTHRC1Q96CG8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTHRC1Q96CG8 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTHRC1Q96CG8 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTHRC1Q96CG8 ABHD17AP1-201ENST00000358206 933 ntBASIC18.4■□□□□ 0.54
CTHRC1Q96CG8 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CTHRC1Q96CG8 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.4■□□□□ 0.54
CTHRC1Q96CG8 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTHRC1Q96CG8 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CTHRC1Q96CG8 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.4■□□□□ 0.54
CTHRC1Q96CG8 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.4■□□□□ 0.54
CTHRC1Q96CG8 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.4■□□□□ 0.54
CTHRC1Q96CG8 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTHRC1Q96CG8 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms