Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM43Q96BQ3 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM43Q96BQ3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.66■■□□□ 1.06
TRIM43Q96BQ3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM43Q96BQ3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM43Q96BQ3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC21.66■■□□□ 1.06
TRIM43Q96BQ3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.66■■□□□ 1.06
TRIM43Q96BQ3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.66■■□□□ 1.06
TRIM43Q96BQ3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.66■■□□□ 1.06
TRIM43Q96BQ3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC21.66■■□□□ 1.06
TRIM43Q96BQ3 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.66■■□□□ 1.06
TRIM43Q96BQ3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
TRIM43Q96BQ3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.66■■□□□ 1.06
TRIM43Q96BQ3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM43Q96BQ3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM43Q96BQ3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.66■■□□□ 1.06
TRIM43Q96BQ3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.66■■□□□ 1.06
TRIM43Q96BQ3 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
TRIM43Q96BQ3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM43Q96BQ3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM43Q96BQ3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
TRIM43Q96BQ3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM43Q96BQ3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM43Q96BQ3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM43Q96BQ3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM43Q96BQ3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
TRIM43Q96BQ3 AC096733.2-201ENST00000609937 1394 ntBASIC21.65■■□□□ 1.06
TRIM43Q96BQ3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
TRIM43Q96BQ3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM43Q96BQ3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM43Q96BQ3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIM43Q96BQ3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM43Q96BQ3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM43Q96BQ3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.65■■□□□ 1.06
TRIM43Q96BQ3 SLC25A1P2-201ENST00000430693 912 ntBASIC21.65■■□□□ 1.06
TRIM43Q96BQ3 HCG4P8-203ENST00000443049 980 ntBASIC21.65■■□□□ 1.06
TRIM43Q96BQ3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.65■■□□□ 1.06
TRIM43Q96BQ3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.65■■□□□ 1.06
TRIM43Q96BQ3 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.65■■□□□ 1.06
TRIM43Q96BQ3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM43Q96BQ3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.65■■□□□ 1.06
TRIM43Q96BQ3 AC010653.2-201ENST00000623505 997 ntBASIC21.65■■□□□ 1.06
TRIM43Q96BQ3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIM43Q96BQ3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
TRIM43Q96BQ3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.65■■□□□ 1.06
TRIM43Q96BQ3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIM43Q96BQ3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
TRIM43Q96BQ3 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM43Q96BQ3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
TRIM43Q96BQ3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.65■■□□□ 1.06
TRIM43Q96BQ3 AC092338.2-201ENST00000568827 1415 ntBASIC21.64■■□□□ 1.06
TRIM43Q96BQ3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.64■■□□□ 1.06
TRIM43Q96BQ3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
TRIM43Q96BQ3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
TRIM43Q96BQ3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM43Q96BQ3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
TRIM43Q96BQ3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC21.64■■□□□ 1.05
TRIM43Q96BQ3 TUBB8P6-201ENST00000436895 1288 ntBASIC21.64■■□□□ 1.05
TRIM43Q96BQ3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM43Q96BQ3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.64■■□□□ 1.05
TRIM43Q96BQ3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.64■■□□□ 1.05
TRIM43Q96BQ3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM43Q96BQ3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM43Q96BQ3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM43Q96BQ3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.64■■□□□ 1.05
TRIM43Q96BQ3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM43Q96BQ3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.63■■□□□ 1.05
TRIM43Q96BQ3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
TRIM43Q96BQ3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM43Q96BQ3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM43Q96BQ3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM43Q96BQ3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM43Q96BQ3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM43Q96BQ3 TFP1-202ENST00000475455 1573 ntBASIC21.63■■□□□ 1.05
TRIM43Q96BQ3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM43Q96BQ3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM43Q96BQ3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.63■■□□□ 1.05
TRIM43Q96BQ3 YBX1P10-201ENST00000444752 975 ntBASIC21.63■■□□□ 1.05
TRIM43Q96BQ3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.63■■□□□ 1.05
TRIM43Q96BQ3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.63■■□□□ 1.05
TRIM43Q96BQ3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC21.63■■□□□ 1.05
TRIM43Q96BQ3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.63■■□□□ 1.05
TRIM43Q96BQ3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.63■■□□□ 1.05
TRIM43Q96BQ3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.63■■□□□ 1.05
TRIM43Q96BQ3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM43Q96BQ3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM43Q96BQ3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM43Q96BQ3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM43Q96BQ3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM43Q96BQ3 AC005332.1-201ENST00000577698 1310 ntBASIC21.62■■□□□ 1.05
TRIM43Q96BQ3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM43Q96BQ3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM43Q96BQ3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM43Q96BQ3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM43Q96BQ3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
TRIM43Q96BQ3 AC004951.3-201ENST00000418645 1148 ntBASIC21.62■■□□□ 1.05
TRIM43Q96BQ3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.62■■□□□ 1.05
TRIM43Q96BQ3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
TRIM43Q96BQ3 AL671277.2-201ENST00000458060 996 ntBASIC21.62■■□□□ 1.05
TRIM43Q96BQ3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms