Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MBD3L1Q8WWY6 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MBD3L1Q8WWY6 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MBD3L1Q8WWY6 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MBD3L1Q8WWY6 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MBD3L1Q8WWY6 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MBD3L1Q8WWY6 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
MBD3L1Q8WWY6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
MBD3L1Q8WWY6 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MBD3L1Q8WWY6 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MBD3L1Q8WWY6 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MBD3L1Q8WWY6 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MBD3L1Q8WWY6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC15.56■□□□□ 0.08
MBD3L1Q8WWY6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
MBD3L1Q8WWY6 UNC93B8-201ENST00000511903 705 ntBASIC15.56■□□□□ 0.08
MBD3L1Q8WWY6 AC008175.2-201ENST00000612840 297 ntBASIC15.56■□□□□ 0.08
MBD3L1Q8WWY6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MBD3L1Q8WWY6 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MBD3L1Q8WWY6 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MBD3L1Q8WWY6 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MBD3L1Q8WWY6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
MBD3L1Q8WWY6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.56■□□□□ 0.08
MBD3L1Q8WWY6 AC090164.3-201ENST00000610780 2143 ntBASIC15.56■□□□□ 0.08
MBD3L1Q8WWY6 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MBD3L1Q8WWY6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MBD3L1Q8WWY6 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MBD3L1Q8WWY6 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
MBD3L1Q8WWY6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MBD3L1Q8WWY6 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MBD3L1Q8WWY6 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MBD3L1Q8WWY6 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MBD3L1Q8WWY6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
MBD3L1Q8WWY6 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MBD3L1Q8WWY6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
MBD3L1Q8WWY6 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MBD3L1Q8WWY6 AP000997.3-201ENST00000623333 2250 ntBASIC15.55■□□□□ 0.08
MBD3L1Q8WWY6 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MBD3L1Q8WWY6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC15.55■□□□□ 0.08
MBD3L1Q8WWY6 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15.55■□□□□ 0.08
MBD3L1Q8WWY6 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC15.55■□□□□ 0.08
MBD3L1Q8WWY6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
MBD3L1Q8WWY6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
MBD3L1Q8WWY6 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC15.55■□□□□ 0.08
MBD3L1Q8WWY6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
MBD3L1Q8WWY6 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MBD3L1Q8WWY6 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC15.55■□□□□ 0.08
MBD3L1Q8WWY6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC15.55■□□□□ 0.08
MBD3L1Q8WWY6 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC15.55■□□□□ 0.08
MBD3L1Q8WWY6 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC15.55■□□□□ 0.08
MBD3L1Q8WWY6 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC15.55■□□□□ 0.08
MBD3L1Q8WWY6 DUX4L19-201ENST00000557448 1267 ntBASIC15.55■□□□□ 0.08
MBD3L1Q8WWY6 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
MBD3L1Q8WWY6 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MBD3L1Q8WWY6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MBD3L1Q8WWY6 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.55■□□□□ 0.08
MBD3L1Q8WWY6 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MBD3L1Q8WWY6 NOC2LP2-201ENST00000407594 1944 ntBASIC15.55■□□□□ 0.08
MBD3L1Q8WWY6 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC15.54■□□□□ 0.08
MBD3L1Q8WWY6 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.54■□□□□ 0.08
MBD3L1Q8WWY6 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
MBD3L1Q8WWY6 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MBD3L1Q8WWY6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MBD3L1Q8WWY6 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MBD3L1Q8WWY6 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
MBD3L1Q8WWY6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MBD3L1Q8WWY6 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MBD3L1Q8WWY6 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MBD3L1Q8WWY6 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC15.54■□□□□ 0.08
MBD3L1Q8WWY6 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MBD3L1Q8WWY6 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC15.54■□□□□ 0.08
MBD3L1Q8WWY6 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MBD3L1Q8WWY6 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MBD3L1Q8WWY6 RASSF1-AS1-201ENST00000629828 790 ntBASIC15.54■□□□□ 0.08
MBD3L1Q8WWY6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC15.54■□□□□ 0.08
MBD3L1Q8WWY6 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MBD3L1Q8WWY6 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
MBD3L1Q8WWY6 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
MBD3L1Q8WWY6 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.54■□□□□ 0.08
MBD3L1Q8WWY6 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MBD3L1Q8WWY6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
MBD3L1Q8WWY6 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MBD3L1Q8WWY6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
MBD3L1Q8WWY6 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
MBD3L1Q8WWY6 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MBD3L1Q8WWY6 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
MBD3L1Q8WWY6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MBD3L1Q8WWY6 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MBD3L1Q8WWY6 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MBD3L1Q8WWY6 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MBD3L1Q8WWY6 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
MBD3L1Q8WWY6 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MBD3L1Q8WWY6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
MBD3L1Q8WWY6 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC15.53■□□□□ 0.08
MBD3L1Q8WWY6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.53■□□□□ 0.08
MBD3L1Q8WWY6 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MBD3L1Q8WWY6 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
MBD3L1Q8WWY6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC15.53■□□□□ 0.08
MBD3L1Q8WWY6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC15.53■□□□□ 0.08
MBD3L1Q8WWY6 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MBD3L1Q8WWY6 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms