Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SNED1Q8TER0 CRYGFP-201ENST00000418459 633 ntBASIC24.29■■□□□ 1.48
SNED1Q8TER0 YBX1P10-201ENST00000444752 975 ntBASIC24.29■■□□□ 1.48
SNED1Q8TER0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC24.29■■□□□ 1.48
SNED1Q8TER0 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SNED1Q8TER0 AL121603.2-201ENST00000557373 2117 ntBASIC24.29■■□□□ 1.48
SNED1Q8TER0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SNED1Q8TER0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC24.29■■□□□ 1.48
SNED1Q8TER0 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SNED1Q8TER0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC24.29■■□□□ 1.48
SNED1Q8TER0 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SNED1Q8TER0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC24.29■■□□□ 1.48
SNED1Q8TER0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC24.29■■□□□ 1.48
SNED1Q8TER0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
SNED1Q8TER0 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SNED1Q8TER0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SNED1Q8TER0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC24.29■■□□□ 1.48
SNED1Q8TER0 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SNED1Q8TER0 AL024507.2-201ENST00000606070 2574 ntBASIC24.29■■□□□ 1.48
SNED1Q8TER0 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC24.28■■□□□ 1.48
SNED1Q8TER0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SNED1Q8TER0 AL031133.1-201ENST00000406807 723 ntBASIC24.28■■□□□ 1.48
SNED1Q8TER0 AK4P3-201ENST00000418260 669 ntBASIC24.28■■□□□ 1.48
SNED1Q8TER0 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC24.28■■□□□ 1.48
SNED1Q8TER0 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC24.28■■□□□ 1.48
SNED1Q8TER0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SNED1Q8TER0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SNED1Q8TER0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC24.28■■□□□ 1.48
SNED1Q8TER0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC24.28■■□□□ 1.48
SNED1Q8TER0 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC24.28■■□□□ 1.48
SNED1Q8TER0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC24.28■■□□□ 1.48
SNED1Q8TER0 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
SNED1Q8TER0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
SNED1Q8TER0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
SNED1Q8TER0 AP006587.1-201ENST00000534129 1502 ntBASIC24.27■■□□□ 1.48
SNED1Q8TER0 UPK3BP1-201ENST00000428678 509 ntBASIC24.27■■□□□ 1.48
SNED1Q8TER0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC24.27■■□□□ 1.48
SNED1Q8TER0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC24.27■■□□□ 1.48
SNED1Q8TER0 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC24.27■■□□□ 1.48
SNED1Q8TER0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
SNED1Q8TER0 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SNED1Q8TER0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SNED1Q8TER0 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
SNED1Q8TER0 AC096733.2-201ENST00000609937 1394 ntBASIC24.27■■□□□ 1.48
SNED1Q8TER0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SNED1Q8TER0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SNED1Q8TER0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SNED1Q8TER0 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
SNED1Q8TER0 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC24.27■■□□□ 1.48
SNED1Q8TER0 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC24.27■■□□□ 1.48
SNED1Q8TER0 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC24.27■■□□□ 1.48
SNED1Q8TER0 AC097488.1-201ENST00000507834 756 ntBASIC24.27■■□□□ 1.48
SNED1Q8TER0 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC24.27■■□□□ 1.48
SNED1Q8TER0 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC24.27■■□□□ 1.48
SNED1Q8TER0 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC24.27■■□□□ 1.48
SNED1Q8TER0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.47
SNED1Q8TER0 KRT8P17-201ENST00000453110 1448 ntBASIC24.26■■□□□ 1.47
SNED1Q8TER0 TFP1-202ENST00000475455 1573 ntBASIC24.26■■□□□ 1.47
SNED1Q8TER0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SNED1Q8TER0 AL049796.1-201ENST00000565336 1766 ntBASIC24.26■■□□□ 1.47
SNED1Q8TER0 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
SNED1Q8TER0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SNED1Q8TER0 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC24.26■■□□□ 1.47
SNED1Q8TER0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
SNED1Q8TER0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC24.26■■□□□ 1.47
SNED1Q8TER0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
SNED1Q8TER0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
SNED1Q8TER0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
SNED1Q8TER0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
SNED1Q8TER0 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC24.26■■□□□ 1.47
SNED1Q8TER0 LIN28AP1-201ENST00000429574 405 ntBASIC24.26■■□□□ 1.47
SNED1Q8TER0 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC24.26■■□□□ 1.47
SNED1Q8TER0 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SNED1Q8TER0 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
SNED1Q8TER0 METTL23-204ENST00000586752 904 ntTSL 2 BASIC24.26■■□□□ 1.47
SNED1Q8TER0 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC24.26■■□□□ 1.47
SNED1Q8TER0 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
SNED1Q8TER0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC24.25■■□□□ 1.47
SNED1Q8TER0 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SNED1Q8TER0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC24.25■■□□□ 1.47
SNED1Q8TER0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
SNED1Q8TER0 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
SNED1Q8TER0 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC24.25■■□□□ 1.47
SNED1Q8TER0 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
SNED1Q8TER0 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
SNED1Q8TER0 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
SNED1Q8TER0 SAPCD2P2-201ENST00000431719 1174 ntBASIC24.25■■□□□ 1.47
SNED1Q8TER0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC24.25■■□□□ 1.47
SNED1Q8TER0 BX664615.1-201ENST00000443558 458 ntBASIC24.25■■□□□ 1.47
SNED1Q8TER0 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
SNED1Q8TER0 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
SNED1Q8TER0 AC008040.2-201ENST00000461049 708 ntBASIC24.25■■□□□ 1.47
SNED1Q8TER0 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
SNED1Q8TER0 TOLLIP-AS1-201ENST00000530897 939 ntBASIC24.25■■□□□ 1.47
SNED1Q8TER0 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC24.25■■□□□ 1.47
SNED1Q8TER0 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC24.25■■□□□ 1.47
SNED1Q8TER0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SNED1Q8TER0 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
SNED1Q8TER0 RCC2P6-201ENST00000526625 1557 ntBASIC24.24■■□□□ 1.47
SNED1Q8TER0 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms