Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.63■□□□□ 0.89
SH3RF2Q8TEC5 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
SH3RF2Q8TEC5 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SH3RF2Q8TEC5 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.63■□□□□ 0.89
SH3RF2Q8TEC5 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.63■□□□□ 0.89
SH3RF2Q8TEC5 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.63■□□□□ 0.89
SH3RF2Q8TEC5 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SH3RF2Q8TEC5 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SH3RF2Q8TEC5 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SH3RF2Q8TEC5 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
SH3RF2Q8TEC5 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SH3RF2Q8TEC5 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SH3RF2Q8TEC5 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SH3RF2Q8TEC5 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.62■□□□□ 0.89
SH3RF2Q8TEC5 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.62■□□□□ 0.89
SH3RF2Q8TEC5 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.62■□□□□ 0.89
SH3RF2Q8TEC5 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
SH3RF2Q8TEC5 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SH3RF2Q8TEC5 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.62■□□□□ 0.89
SH3RF2Q8TEC5 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SH3RF2Q8TEC5 AL353807.1-201ENST00000427475 662 ntBASIC20.62■□□□□ 0.89
SH3RF2Q8TEC5 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SH3RF2Q8TEC5 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.62■□□□□ 0.89
SH3RF2Q8TEC5 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.62■□□□□ 0.89
SH3RF2Q8TEC5 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.62■□□□□ 0.89
SH3RF2Q8TEC5 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.62■□□□□ 0.89
SH3RF2Q8TEC5 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.62■□□□□ 0.89
SH3RF2Q8TEC5 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
SH3RF2Q8TEC5 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SH3RF2Q8TEC5 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SH3RF2Q8TEC5 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SH3RF2Q8TEC5 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SH3RF2Q8TEC5 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.62■□□□□ 0.89
SH3RF2Q8TEC5 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SH3RF2Q8TEC5 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SH3RF2Q8TEC5 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SH3RF2Q8TEC5 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SH3RF2Q8TEC5 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SH3RF2Q8TEC5 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SH3RF2Q8TEC5 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SH3RF2Q8TEC5 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SH3RF2Q8TEC5 AL355075.4-201ENST00000554988 638 ntBASIC20.61■□□□□ 0.89
SH3RF2Q8TEC5 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.61■□□□□ 0.89
SH3RF2Q8TEC5 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.61■□□□□ 0.89
SH3RF2Q8TEC5 AC026471.5-201ENST00000615068 467 ntBASIC20.61■□□□□ 0.89
SH3RF2Q8TEC5 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SH3RF2Q8TEC5 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SH3RF2Q8TEC5 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SH3RF2Q8TEC5 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SH3RF2Q8TEC5 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
SH3RF2Q8TEC5 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SH3RF2Q8TEC5 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SH3RF2Q8TEC5 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SH3RF2Q8TEC5 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.6■□□□□ 0.89
SH3RF2Q8TEC5 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SH3RF2Q8TEC5 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.6■□□□□ 0.89
SH3RF2Q8TEC5 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.6■□□□□ 0.89
SH3RF2Q8TEC5 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.6■□□□□ 0.89
SH3RF2Q8TEC5 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SH3RF2Q8TEC5 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.6■□□□□ 0.89
SH3RF2Q8TEC5 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.6■□□□□ 0.89
SH3RF2Q8TEC5 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SH3RF2Q8TEC5 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.6■□□□□ 0.89
SH3RF2Q8TEC5 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.6■□□□□ 0.89
SH3RF2Q8TEC5 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.6■□□□□ 0.89
SH3RF2Q8TEC5 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.6■□□□□ 0.89
SH3RF2Q8TEC5 CD177P1-201ENST00000606252 935 ntBASIC20.6■□□□□ 0.89
SH3RF2Q8TEC5 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.6■□□□□ 0.89
SH3RF2Q8TEC5 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.6■□□□□ 0.89
SH3RF2Q8TEC5 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.6■□□□□ 0.89
SH3RF2Q8TEC5 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SH3RF2Q8TEC5 AC092720.2-201ENST00000602388 1665 ntBASIC20.6■□□□□ 0.89
SH3RF2Q8TEC5 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
SH3RF2Q8TEC5 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SH3RF2Q8TEC5 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SH3RF2Q8TEC5 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.59■□□□□ 0.89
SH3RF2Q8TEC5 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SH3RF2Q8TEC5 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SH3RF2Q8TEC5 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.59■□□□□ 0.89
SH3RF2Q8TEC5 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.59■□□□□ 0.89
SH3RF2Q8TEC5 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
SH3RF2Q8TEC5 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SH3RF2Q8TEC5 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SH3RF2Q8TEC5 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SH3RF2Q8TEC5 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SH3RF2Q8TEC5 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SH3RF2Q8TEC5 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SH3RF2Q8TEC5 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.59■□□□□ 0.89
SH3RF2Q8TEC5 FAM197Y1-201ENST00000421178 764 ntBASIC20.59■□□□□ 0.89
SH3RF2Q8TEC5 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SH3RF2Q8TEC5 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.59■□□□□ 0.89
SH3RF2Q8TEC5 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.59■□□□□ 0.89
SH3RF2Q8TEC5 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.59■□□□□ 0.89
SH3RF2Q8TEC5 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SH3RF2Q8TEC5 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SH3RF2Q8TEC5 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SH3RF2Q8TEC5 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.59■□□□□ 0.89
SH3RF2Q8TEC5 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SH3RF2Q8TEC5 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SH3RF2Q8TEC5 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms