Protein–RNA interactions for Protein: Q8NEV1

CSNK2A3, Casein kinase II subunit alpha 3, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A3Q8NEV1 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CSNK2A3Q8NEV1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
CSNK2A3Q8NEV1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.26■□□□□ 0.35
CSNK2A3Q8NEV1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK2A3Q8NEV1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CSNK2A3Q8NEV1 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK2A3Q8NEV1 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK2A3Q8NEV1 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK2A3Q8NEV1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK2A3Q8NEV1 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK2A3Q8NEV1 AL355472.2-201ENST00000422958 438 ntBASIC17.26■□□□□ 0.35
CSNK2A3Q8NEV1 CDCA4P2-201ENST00000441182 718 ntBASIC17.26■□□□□ 0.35
CSNK2A3Q8NEV1 AF201337.1-201ENST00000520239 748 ntBASIC17.26■□□□□ 0.35
CSNK2A3Q8NEV1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.26■□□□□ 0.35
CSNK2A3Q8NEV1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK2A3Q8NEV1 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.26■□□□□ 0.35
CSNK2A3Q8NEV1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
CSNK2A3Q8NEV1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CSNK2A3Q8NEV1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
CSNK2A3Q8NEV1 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CSNK2A3Q8NEV1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.26■□□□□ 0.35
CSNK2A3Q8NEV1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK2A3Q8NEV1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.26■□□□□ 0.35
CSNK2A3Q8NEV1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK2A3Q8NEV1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK2A3Q8NEV1 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK2A3Q8NEV1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.25■□□□□ 0.35
CSNK2A3Q8NEV1 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.25■□□□□ 0.35
CSNK2A3Q8NEV1 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK2A3Q8NEV1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.25■□□□□ 0.35
CSNK2A3Q8NEV1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK2A3Q8NEV1 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
CSNK2A3Q8NEV1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK2A3Q8NEV1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.25■□□□□ 0.35
CSNK2A3Q8NEV1 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.25■□□□□ 0.35
CSNK2A3Q8NEV1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK2A3Q8NEV1 BX119927.1-201ENST00000636596 1552 ntBASIC17.25■□□□□ 0.35
CSNK2A3Q8NEV1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.25■□□□□ 0.35
CSNK2A3Q8NEV1 LSM12P1-201ENST00000411836 588 ntBASIC17.25■□□□□ 0.35
CSNK2A3Q8NEV1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.25■□□□□ 0.35
CSNK2A3Q8NEV1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK2A3Q8NEV1 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK2A3Q8NEV1 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CSNK2A3Q8NEV1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.25■□□□□ 0.35
CSNK2A3Q8NEV1 AC087289.5-201ENST00000586076 3175 ntBASIC17.25■□□□□ 0.35
CSNK2A3Q8NEV1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CSNK2A3Q8NEV1 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSNK2A3Q8NEV1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CSNK2A3Q8NEV1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.24■□□□□ 0.35
CSNK2A3Q8NEV1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK2A3Q8NEV1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.24■□□□□ 0.35
CSNK2A3Q8NEV1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.24■□□□□ 0.35
CSNK2A3Q8NEV1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK2A3Q8NEV1 TCF3P1-201ENST00000423021 1937 ntBASIC17.24■□□□□ 0.35
CSNK2A3Q8NEV1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CSNK2A3Q8NEV1 AC093787.1-201ENST00000450396 207 ntBASIC17.24■□□□□ 0.35
CSNK2A3Q8NEV1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.24■□□□□ 0.35
CSNK2A3Q8NEV1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.24■□□□□ 0.35
CSNK2A3Q8NEV1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK2A3Q8NEV1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.24■□□□□ 0.35
CSNK2A3Q8NEV1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK2A3Q8NEV1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CSNK2A3Q8NEV1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.24■□□□□ 0.35
CSNK2A3Q8NEV1 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK2A3Q8NEV1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK2A3Q8NEV1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK2A3Q8NEV1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK2A3Q8NEV1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.24■□□□□ 0.35
CSNK2A3Q8NEV1 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CSNK2A3Q8NEV1 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CSNK2A3Q8NEV1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK2A3Q8NEV1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.23■□□□□ 0.35
CSNK2A3Q8NEV1 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CSNK2A3Q8NEV1 KRT8P17-201ENST00000453110 1448 ntBASIC17.23■□□□□ 0.35
CSNK2A3Q8NEV1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK2A3Q8NEV1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK2A3Q8NEV1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK2A3Q8NEV1 MKRN4P-201ENST00000444706 1521 ntBASIC17.23■□□□□ 0.35
CSNK2A3Q8NEV1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.23■□□□□ 0.35
CSNK2A3Q8NEV1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK2A3Q8NEV1 MIR663A-201ENST00000385250 93 ntBASIC17.23■□□□□ 0.35
CSNK2A3Q8NEV1 C2orf69P4-201ENST00000565394 541 ntBASIC17.23■□□□□ 0.35
CSNK2A3Q8NEV1 AC105036.2-201ENST00000569468 176 ntBASIC17.23■□□□□ 0.35
CSNK2A3Q8NEV1 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK2A3Q8NEV1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.23■□□□□ 0.35
CSNK2A3Q8NEV1 AL031963.3-201ENST00000606441 850 ntBASIC17.23■□□□□ 0.35
CSNK2A3Q8NEV1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK2A3Q8NEV1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.23■□□□□ 0.35
CSNK2A3Q8NEV1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK2A3Q8NEV1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK2A3Q8NEV1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK2A3Q8NEV1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
CSNK2A3Q8NEV1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK2A3Q8NEV1 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.23■□□□□ 0.35
CSNK2A3Q8NEV1 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.23■□□□□ 0.35
CSNK2A3Q8NEV1 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
CSNK2A3Q8NEV1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CSNK2A3Q8NEV1 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK2A3Q8NEV1 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK2A3Q8NEV1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms