Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RTL9Q8NET4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC24.52■■□□□ 1.52
RTL9Q8NET4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RTL9Q8NET4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RTL9Q8NET4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC24.52■■□□□ 1.52
RTL9Q8NET4 PHGDH-210ENST00000641115 1638 ntBASIC24.52■■□□□ 1.52
RTL9Q8NET4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RTL9Q8NET4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC24.52■■□□□ 1.52
RTL9Q8NET4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC24.52■■□□□ 1.52
RTL9Q8NET4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC24.52■■□□□ 1.52
RTL9Q8NET4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC24.52■■□□□ 1.52
RTL9Q8NET4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC24.52■■□□□ 1.52
RTL9Q8NET4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC24.52■■□□□ 1.52
RTL9Q8NET4 AC026271.3-201ENST00000571884 352 ntBASIC24.52■■□□□ 1.52
RTL9Q8NET4 AL445675.2-201ENST00000620291 557 ntBASIC24.52■■□□□ 1.52
RTL9Q8NET4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RTL9Q8NET4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RTL9Q8NET4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RTL9Q8NET4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
RTL9Q8NET4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
RTL9Q8NET4 AC079598.2-202ENST00000546624 1451 ntBASIC24.51■■□□□ 1.51
RTL9Q8NET4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
RTL9Q8NET4 MMP23A-201ENST00000234610 1017 ntBASIC24.51■■□□□ 1.51
RTL9Q8NET4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC24.51■■□□□ 1.51
RTL9Q8NET4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC24.51■■□□□ 1.51
RTL9Q8NET4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
RTL9Q8NET4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
RTL9Q8NET4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
RTL9Q8NET4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
RTL9Q8NET4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC24.51■■□□□ 1.51
RTL9Q8NET4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC24.5■■□□□ 1.51
RTL9Q8NET4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RTL9Q8NET4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RTL9Q8NET4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC24.5■■□□□ 1.51
RTL9Q8NET4 KRT8P9-201ENST00000558927 1449 ntBASIC24.5■■□□□ 1.51
RTL9Q8NET4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC24.5■■□□□ 1.51
RTL9Q8NET4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RTL9Q8NET4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RTL9Q8NET4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC24.5■■□□□ 1.51
RTL9Q8NET4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RTL9Q8NET4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RTL9Q8NET4 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RTL9Q8NET4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RTL9Q8NET4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RTL9Q8NET4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC24.5■■□□□ 1.51
RTL9Q8NET4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC24.5■■□□□ 1.51
RTL9Q8NET4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RTL9Q8NET4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
RTL9Q8NET4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RTL9Q8NET4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC24.49■■□□□ 1.51
RTL9Q8NET4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
RTL9Q8NET4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC24.49■■□□□ 1.51
RTL9Q8NET4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC24.49■■□□□ 1.51
RTL9Q8NET4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
RTL9Q8NET4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
RTL9Q8NET4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RTL9Q8NET4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC24.49■■□□□ 1.51
RTL9Q8NET4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RTL9Q8NET4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC24.49■■□□□ 1.51
RTL9Q8NET4 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC24.49■■□□□ 1.51
RTL9Q8NET4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC24.49■■□□□ 1.51
RTL9Q8NET4 KRT18P35-201ENST00000510488 1269 ntBASIC24.49■■□□□ 1.51
RTL9Q8NET4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC24.49■■□□□ 1.51
RTL9Q8NET4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC24.49■■□□□ 1.51
RTL9Q8NET4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC24.49■■□□□ 1.51
RTL9Q8NET4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
RTL9Q8NET4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
RTL9Q8NET4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC24.49■■□□□ 1.51
RTL9Q8NET4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RTL9Q8NET4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
RTL9Q8NET4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RTL9Q8NET4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RTL9Q8NET4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC24.49■■□□□ 1.51
RTL9Q8NET4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RTL9Q8NET4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RTL9Q8NET4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
RTL9Q8NET4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
RTL9Q8NET4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RTL9Q8NET4 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC24.48■■□□□ 1.51
RTL9Q8NET4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RTL9Q8NET4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC24.48■■□□□ 1.51
RTL9Q8NET4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC24.48■■□□□ 1.51
RTL9Q8NET4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC24.48■■□□□ 1.51
RTL9Q8NET4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RTL9Q8NET4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
RTL9Q8NET4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
RTL9Q8NET4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC24.48■■□□□ 1.51
RTL9Q8NET4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC24.48■■□□□ 1.51
RTL9Q8NET4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RTL9Q8NET4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RTL9Q8NET4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
RTL9Q8NET4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RTL9Q8NET4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
RTL9Q8NET4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RTL9Q8NET4 BX119927.1-201ENST00000636596 1552 ntBASIC24.47■■□□□ 1.51
RTL9Q8NET4 UNC93B2-201ENST00000285383 730 ntBASIC24.47■■□□□ 1.51
RTL9Q8NET4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
RTL9Q8NET4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
RTL9Q8NET4 PPP1R14BP5-201ENST00000440334 435 ntBASIC24.47■■□□□ 1.51
RTL9Q8NET4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms