Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
TMEM35BQ8NCS4 AC092368.3-202ENST00000574180 1591 ntBASIC21.03■□□□□ 0.96
TMEM35BQ8NCS4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM35BQ8NCS4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.03■□□□□ 0.96
TMEM35BQ8NCS4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM35BQ8NCS4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.03■□□□□ 0.96
TMEM35BQ8NCS4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.03■□□□□ 0.96
TMEM35BQ8NCS4 AC060766.5-201ENST00000590539 871 ntBASIC21.03■□□□□ 0.96
TMEM35BQ8NCS4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM35BQ8NCS4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM35BQ8NCS4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.03■□□□□ 0.96
TMEM35BQ8NCS4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
TMEM35BQ8NCS4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
TMEM35BQ8NCS4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM35BQ8NCS4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.02■□□□□ 0.96
TMEM35BQ8NCS4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.02■□□□□ 0.96
TMEM35BQ8NCS4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM35BQ8NCS4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM35BQ8NCS4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.02■□□□□ 0.96
TMEM35BQ8NCS4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM35BQ8NCS4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM35BQ8NCS4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.02■□□□□ 0.96
TMEM35BQ8NCS4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
TMEM35BQ8NCS4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM35BQ8NCS4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM35BQ8NCS4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM35BQ8NCS4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.02■□□□□ 0.95
TMEM35BQ8NCS4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
TMEM35BQ8NCS4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
TMEM35BQ8NCS4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TMEM35BQ8NCS4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
TMEM35BQ8NCS4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM35BQ8NCS4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TMEM35BQ8NCS4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM35BQ8NCS4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
TMEM35BQ8NCS4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM35BQ8NCS4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.01■□□□□ 0.95
TMEM35BQ8NCS4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM35BQ8NCS4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.01■□□□□ 0.95
TMEM35BQ8NCS4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.01■□□□□ 0.95
TMEM35BQ8NCS4 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.01■□□□□ 0.95
TMEM35BQ8NCS4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.01■□□□□ 0.95
TMEM35BQ8NCS4 AC006557.6-201ENST00000623071 864 ntBASIC21.01■□□□□ 0.95
TMEM35BQ8NCS4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM35BQ8NCS4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM35BQ8NCS4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.01■□□□□ 0.95
TMEM35BQ8NCS4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM35BQ8NCS4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.01■□□□□ 0.95
TMEM35BQ8NCS4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21■□□□□ 0.95
TMEM35BQ8NCS4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM35BQ8NCS4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
TMEM35BQ8NCS4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM35BQ8NCS4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM35BQ8NCS4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM35BQ8NCS4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
TMEM35BQ8NCS4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM35BQ8NCS4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM35BQ8NCS4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM35BQ8NCS4 PNMA6B-201ENST00000538162 1200 ntBASIC21■□□□□ 0.95
TMEM35BQ8NCS4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21■□□□□ 0.95
TMEM35BQ8NCS4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21■□□□□ 0.95
TMEM35BQ8NCS4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21■□□□□ 0.95
TMEM35BQ8NCS4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM35BQ8NCS4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21■□□□□ 0.95
TMEM35BQ8NCS4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21■□□□□ 0.95
TMEM35BQ8NCS4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21■□□□□ 0.95
TMEM35BQ8NCS4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM35BQ8NCS4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21■□□□□ 0.95
TMEM35BQ8NCS4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM35BQ8NCS4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21■□□□□ 0.95
TMEM35BQ8NCS4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM35BQ8NCS4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM35BQ8NCS4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM35BQ8NCS4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.99■□□□□ 0.95
TMEM35BQ8NCS4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM35BQ8NCS4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.99■□□□□ 0.95
TMEM35BQ8NCS4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM35BQ8NCS4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.99■□□□□ 0.95
TMEM35BQ8NCS4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM35BQ8NCS4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM35BQ8NCS4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
TMEM35BQ8NCS4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.99■□□□□ 0.95
TMEM35BQ8NCS4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.99■□□□□ 0.95
TMEM35BQ8NCS4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.99■□□□□ 0.95
TMEM35BQ8NCS4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
TMEM35BQ8NCS4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.99■□□□□ 0.95
TMEM35BQ8NCS4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
TMEM35BQ8NCS4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM35BQ8NCS4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM35BQ8NCS4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
TMEM35BQ8NCS4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.99■□□□□ 0.95
TMEM35BQ8NCS4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.99■□□□□ 0.95
TMEM35BQ8NCS4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.99■□□□□ 0.95
TMEM35BQ8NCS4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.99■□□□□ 0.95
TMEM35BQ8NCS4 AC125437.2-201ENST00000625180 2167 ntBASIC20.99■□□□□ 0.95
TMEM35BQ8NCS4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM35BQ8NCS4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
TMEM35BQ8NCS4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
TMEM35BQ8NCS4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.98■□□□□ 0.95
TMEM35BQ8NCS4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms