Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TTC39CQ8N584 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TTC39CQ8N584 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TTC39CQ8N584 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.11■□□□□ 0.97
TTC39CQ8N584 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC39CQ8N584 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC39CQ8N584 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC39CQ8N584 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TTC39CQ8N584 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
TTC39CQ8N584 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC39CQ8N584 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
TTC39CQ8N584 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC39CQ8N584 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.11■□□□□ 0.97
TTC39CQ8N584 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC39CQ8N584 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TTC39CQ8N584 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.11■□□□□ 0.97
TTC39CQ8N584 AC069544.1-201ENST00000609399 999 ntBASIC21.11■□□□□ 0.97
TTC39CQ8N584 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TTC39CQ8N584 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
TTC39CQ8N584 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC39CQ8N584 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TTC39CQ8N584 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC39CQ8N584 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.11■□□□□ 0.97
TTC39CQ8N584 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC39CQ8N584 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.1■□□□□ 0.97
TTC39CQ8N584 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC39CQ8N584 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.1■□□□□ 0.97
TTC39CQ8N584 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.1■□□□□ 0.97
TTC39CQ8N584 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.1■□□□□ 0.97
TTC39CQ8N584 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.1■□□□□ 0.97
TTC39CQ8N584 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TTC39CQ8N584 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
TTC39CQ8N584 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.1■□□□□ 0.97
TTC39CQ8N584 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.1■□□□□ 0.97
TTC39CQ8N584 MIR4651-201ENST00000582622 73 ntBASIC21.1■□□□□ 0.97
TTC39CQ8N584 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TTC39CQ8N584 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC39CQ8N584 AL391422.3-201ENST00000603791 2761 ntBASIC21.1■□□□□ 0.97
TTC39CQ8N584 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC39CQ8N584 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.1■□□□□ 0.97
TTC39CQ8N584 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC39CQ8N584 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TTC39CQ8N584 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
TTC39CQ8N584 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.09■□□□□ 0.97
TTC39CQ8N584 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
TTC39CQ8N584 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TTC39CQ8N584 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TTC39CQ8N584 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.09■□□□□ 0.97
TTC39CQ8N584 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TTC39CQ8N584 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TTC39CQ8N584 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TTC39CQ8N584 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.09■□□□□ 0.97
TTC39CQ8N584 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.09■□□□□ 0.97
TTC39CQ8N584 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TTC39CQ8N584 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TTC39CQ8N584 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.09■□□□□ 0.97
TTC39CQ8N584 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.09■□□□□ 0.97
TTC39CQ8N584 AC006058.3-201ENST00000606217 1069 ntBASIC21.09■□□□□ 0.97
TTC39CQ8N584 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.09■□□□□ 0.97
TTC39CQ8N584 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TTC39CQ8N584 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
TTC39CQ8N584 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TTC39CQ8N584 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TTC39CQ8N584 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TTC39CQ8N584 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
TTC39CQ8N584 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
TTC39CQ8N584 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.08■□□□□ 0.97
TTC39CQ8N584 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TTC39CQ8N584 AC124283.5-201ENST00000624661 1809 ntBASIC21.08■□□□□ 0.97
TTC39CQ8N584 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TTC39CQ8N584 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.08■□□□□ 0.97
TTC39CQ8N584 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TTC39CQ8N584 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
TTC39CQ8N584 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TTC39CQ8N584 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TTC39CQ8N584 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
TTC39CQ8N584 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TTC39CQ8N584 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.08■□□□□ 0.97
TTC39CQ8N584 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TTC39CQ8N584 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.08■□□□□ 0.97
TTC39CQ8N584 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TTC39CQ8N584 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TTC39CQ8N584 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.08■□□□□ 0.97
TTC39CQ8N584 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.08■□□□□ 0.97
TTC39CQ8N584 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.08■□□□□ 0.97
TTC39CQ8N584 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.08■□□□□ 0.96
TTC39CQ8N584 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TTC39CQ8N584 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
TTC39CQ8N584 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TTC39CQ8N584 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TTC39CQ8N584 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.08■□□□□ 0.96
TTC39CQ8N584 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TTC39CQ8N584 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TTC39CQ8N584 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TTC39CQ8N584 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TTC39CQ8N584 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.07■□□□□ 0.96
TTC39CQ8N584 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.07■□□□□ 0.96
TTC39CQ8N584 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TTC39CQ8N584 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.07■□□□□ 0.96
TTC39CQ8N584 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms