Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.68■□□□□ 0.9
SCML4Q8N228 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SCML4Q8N228 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
SCML4Q8N228 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SCML4Q8N228 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCML4Q8N228 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCML4Q8N228 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SCML4Q8N228 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.68■□□□□ 0.9
SCML4Q8N228 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SCML4Q8N228 NBPF21P-201ENST00000425093 1451 ntBASIC20.68■□□□□ 0.9
SCML4Q8N228 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCML4Q8N228 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCML4Q8N228 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCML4Q8N228 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCML4Q8N228 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.67■□□□□ 0.9
SCML4Q8N228 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCML4Q8N228 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.67■□□□□ 0.9
SCML4Q8N228 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.67■□□□□ 0.9
SCML4Q8N228 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCML4Q8N228 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.67■□□□□ 0.9
SCML4Q8N228 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.67■□□□□ 0.9
SCML4Q8N228 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SCML4Q8N228 YBX1P10-201ENST00000444752 975 ntBASIC20.67■□□□□ 0.9
SCML4Q8N228 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.67■□□□□ 0.9
SCML4Q8N228 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.67■□□□□ 0.9
SCML4Q8N228 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.67■□□□□ 0.9
SCML4Q8N228 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
SCML4Q8N228 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCML4Q8N228 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.67■□□□□ 0.9
SCML4Q8N228 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SCML4Q8N228 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SCML4Q8N228 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
SCML4Q8N228 AP006587.1-201ENST00000534129 1502 ntBASIC20.67■□□□□ 0.9
SCML4Q8N228 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.67■□□□□ 0.9
SCML4Q8N228 TMEM179-206ENST00000616017 1645 ntBASIC20.67■□□□□ 0.9
SCML4Q8N228 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SCML4Q8N228 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.66■□□□□ 0.9
SCML4Q8N228 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCML4Q8N228 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCML4Q8N228 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.66■□□□□ 0.9
SCML4Q8N228 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCML4Q8N228 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCML4Q8N228 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCML4Q8N228 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SCML4Q8N228 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCML4Q8N228 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCML4Q8N228 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.66■□□□□ 0.9
SCML4Q8N228 UBE2SP1-201ENST00000450587 669 ntBASIC20.66■□□□□ 0.9
SCML4Q8N228 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
SCML4Q8N228 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.66■□□□□ 0.9
SCML4Q8N228 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.66■□□□□ 0.9
SCML4Q8N228 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCML4Q8N228 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCML4Q8N228 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCML4Q8N228 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCML4Q8N228 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCML4Q8N228 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCML4Q8N228 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCML4Q8N228 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SCML4Q8N228 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCML4Q8N228 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCML4Q8N228 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCML4Q8N228 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SCML4Q8N228 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SCML4Q8N228 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.65■□□□□ 0.9
SCML4Q8N228 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.65■□□□□ 0.9
SCML4Q8N228 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SCML4Q8N228 KRT16P5-201ENST00000455284 522 ntBASIC20.65■□□□□ 0.9
SCML4Q8N228 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCML4Q8N228 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.65■□□□□ 0.9
SCML4Q8N228 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.65■□□□□ 0.9
SCML4Q8N228 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
SCML4Q8N228 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.65■□□□□ 0.9
SCML4Q8N228 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCML4Q8N228 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SCML4Q8N228 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.65■□□□□ 0.9
SCML4Q8N228 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCML4Q8N228 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.65■□□□□ 0.9
SCML4Q8N228 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SCML4Q8N228 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.64■□□□□ 0.9
SCML4Q8N228 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SCML4Q8N228 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.64■□□□□ 0.9
SCML4Q8N228 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCML4Q8N228 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.64■□□□□ 0.89
SCML4Q8N228 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
SCML4Q8N228 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SCML4Q8N228 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.64■□□□□ 0.89
SCML4Q8N228 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCML4Q8N228 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
SCML4Q8N228 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.64■□□□□ 0.89
SCML4Q8N228 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SCML4Q8N228 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.64■□□□□ 0.89
SCML4Q8N228 KRT18P16-201ENST00000510337 1294 ntBASIC20.64■□□□□ 0.89
SCML4Q8N228 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SCML4Q8N228 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SCML4Q8N228 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCML4Q8N228 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.64■□□□□ 0.89
SCML4Q8N228 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCML4Q8N228 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCML4Q8N228 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms