Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 AC010653.2-201ENST00000623505 997 ntBASIC27.75■■■□□ 2.03
XRN1Q8IZH2 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
XRN1Q8IZH2 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC27.75■■■□□ 2.03
XRN1Q8IZH2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
XRN1Q8IZH2 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC27.74■■■□□ 2.03
XRN1Q8IZH2 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
XRN1Q8IZH2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
XRN1Q8IZH2 AL049796.1-201ENST00000565336 1766 ntBASIC27.74■■■□□ 2.03
XRN1Q8IZH2 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
XRN1Q8IZH2 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC27.74■■■□□ 2.03
XRN1Q8IZH2 AC008622.2-201ENST00000617006 1229 ntBASIC27.74■■■□□ 2.03
XRN1Q8IZH2 AC233723.2-201ENST00000623798 2106 ntBASIC27.74■■■□□ 2.03
XRN1Q8IZH2 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC27.74■■■□□ 2.03
XRN1Q8IZH2 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC27.74■■■□□ 2.03
XRN1Q8IZH2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
XRN1Q8IZH2 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
XRN1Q8IZH2 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
XRN1Q8IZH2 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC27.73■■■□□ 2.03
XRN1Q8IZH2 AC083849.1-201ENST00000615227 514 ntBASIC27.73■■■□□ 2.03
XRN1Q8IZH2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
XRN1Q8IZH2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC27.73■■■□□ 2.03
XRN1Q8IZH2 AL024507.2-201ENST00000606070 2574 ntBASIC27.73■■■□□ 2.03
XRN1Q8IZH2 AC018553.1-201ENST00000616682 1458 ntBASIC27.73■■■□□ 2.03
XRN1Q8IZH2 CD70-202ENST00000423145 881 ntTSL 2 BASIC27.72■■■□□ 2.03
XRN1Q8IZH2 TUBB8P6-201ENST00000436895 1288 ntBASIC27.72■■■□□ 2.03
XRN1Q8IZH2 Z85996.1-201ENST00000494644 937 ntBASIC27.72■■■□□ 2.03
XRN1Q8IZH2 FAM86EP-206ENST00000510506 987 ntBASIC27.72■■■□□ 2.03
XRN1Q8IZH2 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC27.72■■■□□ 2.03
XRN1Q8IZH2 AC116407.4-201ENST00000623319 1061 ntBASIC27.72■■■□□ 2.03
XRN1Q8IZH2 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC27.72■■■□□ 2.03
XRN1Q8IZH2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC27.72■■■□□ 2.03
XRN1Q8IZH2 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC27.72■■■□□ 2.03
XRN1Q8IZH2 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC27.72■■■□□ 2.03
XRN1Q8IZH2 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
XRN1Q8IZH2 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC27.72■■■□□ 2.03
XRN1Q8IZH2 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
XRN1Q8IZH2 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC27.72■■■□□ 2.03
XRN1Q8IZH2 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
XRN1Q8IZH2 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC27.72■■■□□ 2.03
XRN1Q8IZH2 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
XRN1Q8IZH2 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
XRN1Q8IZH2 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC27.72■■■□□ 2.03
XRN1Q8IZH2 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC27.72■■■□□ 2.03
XRN1Q8IZH2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
XRN1Q8IZH2 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC27.72■■■□□ 2.03
XRN1Q8IZH2 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC27.71■■■□□ 2.03
XRN1Q8IZH2 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC27.71■■■□□ 2.03
XRN1Q8IZH2 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
XRN1Q8IZH2 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
XRN1Q8IZH2 AC008040.2-201ENST00000461049 708 ntBASIC27.71■■■□□ 2.03
XRN1Q8IZH2 AL359075.1-203ENST00000462729 1002 ntBASIC27.71■■■□□ 2.03
XRN1Q8IZH2 CD320-202ENST00000537716 1119 ntTSL 2 BASIC27.71■■■□□ 2.03
XRN1Q8IZH2 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC27.71■■■□□ 2.03
XRN1Q8IZH2 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC27.71■■■□□ 2.03
XRN1Q8IZH2 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
XRN1Q8IZH2 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
XRN1Q8IZH2 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC27.71■■■□□ 2.03
XRN1Q8IZH2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC27.71■■■□□ 2.03
XRN1Q8IZH2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
XRN1Q8IZH2 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
XRN1Q8IZH2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
XRN1Q8IZH2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
XRN1Q8IZH2 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
XRN1Q8IZH2 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
XRN1Q8IZH2 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC27.7■■■□□ 2.03
XRN1Q8IZH2 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC27.7■■■□□ 2.03
XRN1Q8IZH2 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC27.7■■■□□ 2.03
XRN1Q8IZH2 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC27.7■■■□□ 2.03
XRN1Q8IZH2 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
XRN1Q8IZH2 AC004951.3-201ENST00000418645 1148 ntBASIC27.7■■■□□ 2.03
XRN1Q8IZH2 KRT126P-201ENST00000549467 1181 ntBASIC27.7■■■□□ 2.03
XRN1Q8IZH2 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC27.7■■■□□ 2.03
XRN1Q8IZH2 AC141257.4-201ENST00000634557 245 ntBASIC27.7■■■□□ 2.03
XRN1Q8IZH2 AC136944.6-201ENST00000634818 245 ntBASIC27.7■■■□□ 2.03
XRN1Q8IZH2 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.02
XRN1Q8IZH2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC27.7■■■□□ 2.02
XRN1Q8IZH2 MED25-212ENST00000618715 1467 ntTSL 5 BASIC27.7■■■□□ 2.02
XRN1Q8IZH2 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
XRN1Q8IZH2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC27.7■■■□□ 2.02
XRN1Q8IZH2 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC27.7■■■□□ 2.02
XRN1Q8IZH2 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC27.7■■■□□ 2.02
XRN1Q8IZH2 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
XRN1Q8IZH2 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC27.7■■■□□ 2.02
XRN1Q8IZH2 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
XRN1Q8IZH2 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
XRN1Q8IZH2 CCR12P-201ENST00000446203 998 ntBASIC27.7■■■□□ 2.02
XRN1Q8IZH2 CYGB-204ENST00000589342 815 ntTSL 3 BASIC27.7■■■□□ 2.02
XRN1Q8IZH2 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
XRN1Q8IZH2 AC005332.1-201ENST00000577698 1310 ntBASIC27.69■■■□□ 2.02
XRN1Q8IZH2 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
XRN1Q8IZH2 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC27.69■■■□□ 2.02
XRN1Q8IZH2 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC27.69■■■□□ 2.02
XRN1Q8IZH2 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC27.69■■■□□ 2.02
XRN1Q8IZH2 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
XRN1Q8IZH2 GXYLT1P6-201ENST00000456472 1187 ntBASIC27.69■■■□□ 2.02
XRN1Q8IZH2 COX11P1-201ENST00000489116 835 ntBASIC27.69■■■□□ 2.02
XRN1Q8IZH2 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC27.69■■■□□ 2.02
XRN1Q8IZH2 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC27.69■■■□□ 2.02
XRN1Q8IZH2 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC27.69■■■□□ 2.02
XRN1Q8IZH2 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC27.69■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms