Protein–RNA interactions for Protein: Q8IYA2

CCDC144CP, Putative coiled-coil domain-containing protein 144C, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CPQ8IYA2 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC144CPQ8IYA2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC144CPQ8IYA2 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC144CPQ8IYA2 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC23.41■■□□□ 1.34
CCDC144CPQ8IYA2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC144CPQ8IYA2 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC23.4■■□□□ 1.34
CCDC144CPQ8IYA2 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
CCDC144CPQ8IYA2 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC144CPQ8IYA2 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC23.4■■□□□ 1.34
CCDC144CPQ8IYA2 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC144CPQ8IYA2 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC144CPQ8IYA2 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC23.4■■□□□ 1.34
CCDC144CPQ8IYA2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC144CPQ8IYA2 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC144CPQ8IYA2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC144CPQ8IYA2 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC144CPQ8IYA2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC144CPQ8IYA2 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC144CPQ8IYA2 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC23.4■■□□□ 1.34
CCDC144CPQ8IYA2 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC23.4■■□□□ 1.34
CCDC144CPQ8IYA2 SLC29A4P2-201ENST00000504749 1089 ntBASIC23.4■■□□□ 1.34
CCDC144CPQ8IYA2 RHOD-202ENST00000532559 538 ntTSL 3 BASIC23.4■■□□□ 1.34
CCDC144CPQ8IYA2 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC23.4■■□□□ 1.34
CCDC144CPQ8IYA2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC144CPQ8IYA2 ARL16-209ENST00000573715 763 ntTSL 3 BASIC23.4■■□□□ 1.34
CCDC144CPQ8IYA2 ARL16-211ENST00000576135 694 ntTSL 3 BASIC23.4■■□□□ 1.34
CCDC144CPQ8IYA2 AC006557.6-201ENST00000623071 864 ntBASIC23.4■■□□□ 1.34
CCDC144CPQ8IYA2 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
CCDC144CPQ8IYA2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC23.4■■□□□ 1.34
CCDC144CPQ8IYA2 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
CCDC144CPQ8IYA2 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC23.4■■□□□ 1.34
CCDC144CPQ8IYA2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
CCDC144CPQ8IYA2 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
CCDC144CPQ8IYA2 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC23.39■■□□□ 1.34
CCDC144CPQ8IYA2 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
CCDC144CPQ8IYA2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
CCDC144CPQ8IYA2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
CCDC144CPQ8IYA2 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC23.39■■□□□ 1.33
CCDC144CPQ8IYA2 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC23.39■■□□□ 1.33
CCDC144CPQ8IYA2 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CCDC144CPQ8IYA2 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC23.39■■□□□ 1.33
CCDC144CPQ8IYA2 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC23.39■■□□□ 1.33
CCDC144CPQ8IYA2 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CCDC144CPQ8IYA2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
CCDC144CPQ8IYA2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
CCDC144CPQ8IYA2 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC23.39■■□□□ 1.33
CCDC144CPQ8IYA2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CCDC144CPQ8IYA2 KRT8P17-201ENST00000453110 1448 ntBASIC23.39■■□□□ 1.33
CCDC144CPQ8IYA2 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
CCDC144CPQ8IYA2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CCDC144CPQ8IYA2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
CCDC144CPQ8IYA2 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CCDC144CPQ8IYA2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CCDC144CPQ8IYA2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC23.38■■□□□ 1.33
CCDC144CPQ8IYA2 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC23.38■■□□□ 1.33
CCDC144CPQ8IYA2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC23.38■■□□□ 1.33
CCDC144CPQ8IYA2 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC23.38■■□□□ 1.33
CCDC144CPQ8IYA2 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CCDC144CPQ8IYA2 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CCDC144CPQ8IYA2 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CCDC144CPQ8IYA2 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC23.38■■□□□ 1.33
CCDC144CPQ8IYA2 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC23.38■■□□□ 1.33
CCDC144CPQ8IYA2 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
CCDC144CPQ8IYA2 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
CCDC144CPQ8IYA2 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC23.38■■□□□ 1.33
CCDC144CPQ8IYA2 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC23.38■■□□□ 1.33
CCDC144CPQ8IYA2 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CCDC144CPQ8IYA2 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC23.38■■□□□ 1.33
CCDC144CPQ8IYA2 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
CCDC144CPQ8IYA2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CCDC144CPQ8IYA2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CCDC144CPQ8IYA2 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
CCDC144CPQ8IYA2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCDC144CPQ8IYA2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC23.37■■□□□ 1.33
CCDC144CPQ8IYA2 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
CCDC144CPQ8IYA2 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CCDC144CPQ8IYA2 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
CCDC144CPQ8IYA2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCDC144CPQ8IYA2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCDC144CPQ8IYA2 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
CCDC144CPQ8IYA2 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCDC144CPQ8IYA2 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CCDC144CPQ8IYA2 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC23.37■■□□□ 1.33
CCDC144CPQ8IYA2 UBE2SP1-201ENST00000450587 669 ntBASIC23.37■■□□□ 1.33
CCDC144CPQ8IYA2 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC23.37■■□□□ 1.33
CCDC144CPQ8IYA2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC23.37■■□□□ 1.33
CCDC144CPQ8IYA2 OR2A1-AS1-207ENST00000486094 819 ntBASIC23.37■■□□□ 1.33
CCDC144CPQ8IYA2 AC008550.1-201ENST00000511500 884 ntBASIC23.37■■□□□ 1.33
CCDC144CPQ8IYA2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCDC144CPQ8IYA2 SOX15-203ENST00000570788 1093 ntBASIC23.37■■□□□ 1.33
CCDC144CPQ8IYA2 AC233263.1-201ENST00000578059 224 ntBASIC23.37■■□□□ 1.33
CCDC144CPQ8IYA2 AL031963.3-201ENST00000606441 850 ntBASIC23.37■■□□□ 1.33
CCDC144CPQ8IYA2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCDC144CPQ8IYA2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CCDC144CPQ8IYA2 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC23.37■■□□□ 1.33
CCDC144CPQ8IYA2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC23.37■■□□□ 1.33
CCDC144CPQ8IYA2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CCDC144CPQ8IYA2 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CCDC144CPQ8IYA2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CCDC144CPQ8IYA2 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms