Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 AC116351.2-201ENST00000606540 1585 ntBASIC24.34■■□□□ 1.49
SLX4Q8IY92 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC24.34■■□□□ 1.49
SLX4Q8IY92 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC24.34■■□□□ 1.49
SLX4Q8IY92 AL359075.1-203ENST00000462729 1002 ntBASIC24.34■■□□□ 1.49
SLX4Q8IY92 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
SLX4Q8IY92 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
SLX4Q8IY92 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SLX4Q8IY92 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC24.34■■□□□ 1.49
SLX4Q8IY92 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC24.34■■□□□ 1.49
SLX4Q8IY92 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SLX4Q8IY92 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
SLX4Q8IY92 GOLGA6L3-201ENST00000507199 1679 ntBASIC24.33■■□□□ 1.49
SLX4Q8IY92 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SLX4Q8IY92 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SLX4Q8IY92 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
SLX4Q8IY92 RNF152P1-201ENST00000397754 604 ntBASIC24.33■■□□□ 1.49
SLX4Q8IY92 CD70-202ENST00000423145 881 ntTSL 2 BASIC24.33■■□□□ 1.49
SLX4Q8IY92 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC24.33■■□□□ 1.49
SLX4Q8IY92 KRT18P48-201ENST00000434763 852 ntBASIC24.33■■□□□ 1.49
SLX4Q8IY92 MFAP1P1-201ENST00000442257 1255 ntBASIC24.33■■□□□ 1.49
SLX4Q8IY92 BX664615.1-201ENST00000443558 458 ntBASIC24.33■■□□□ 1.49
SLX4Q8IY92 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SLX4Q8IY92 AP000692.2-201ENST00000608391 879 ntBASIC24.33■■□□□ 1.49
SLX4Q8IY92 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SLX4Q8IY92 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SLX4Q8IY92 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
SLX4Q8IY92 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
SLX4Q8IY92 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC24.33■■□□□ 1.48
SLX4Q8IY92 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC24.33■■□□□ 1.48
SLX4Q8IY92 AC116407.4-201ENST00000623319 1061 ntBASIC24.33■■□□□ 1.48
SLX4Q8IY92 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC24.33■■□□□ 1.48
SLX4Q8IY92 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.48
SLX4Q8IY92 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
SLX4Q8IY92 AC018553.1-201ENST00000616682 1458 ntBASIC24.33■■□□□ 1.48
SLX4Q8IY92 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SLX4Q8IY92 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SLX4Q8IY92 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC24.32■■□□□ 1.48
SLX4Q8IY92 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SLX4Q8IY92 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SLX4Q8IY92 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC24.32■■□□□ 1.48
SLX4Q8IY92 CYGB-204ENST00000589342 815 ntTSL 3 BASIC24.32■■□□□ 1.48
SLX4Q8IY92 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC24.32■■□□□ 1.48
SLX4Q8IY92 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC24.32■■□□□ 1.48
SLX4Q8IY92 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SLX4Q8IY92 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC24.32■■□□□ 1.48
SLX4Q8IY92 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SLX4Q8IY92 AC005229.4-201ENST00000610085 2198 ntBASIC24.31■■□□□ 1.48
SLX4Q8IY92 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SLX4Q8IY92 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC24.31■■□□□ 1.48
SLX4Q8IY92 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SLX4Q8IY92 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SLX4Q8IY92 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
SLX4Q8IY92 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC24.31■■□□□ 1.48
SLX4Q8IY92 TUBB8P6-201ENST00000436895 1288 ntBASIC24.31■■□□□ 1.48
SLX4Q8IY92 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC24.31■■□□□ 1.48
SLX4Q8IY92 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SLX4Q8IY92 AL049796.1-201ENST00000565336 1766 ntBASIC24.31■■□□□ 1.48
SLX4Q8IY92 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SLX4Q8IY92 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC24.31■■□□□ 1.48
SLX4Q8IY92 AC121338.2-201ENST00000622535 1744 ntBASIC24.31■■□□□ 1.48
SLX4Q8IY92 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
SLX4Q8IY92 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC24.31■■□□□ 1.48
SLX4Q8IY92 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC24.31■■□□□ 1.48
SLX4Q8IY92 FAM86EP-206ENST00000510506 987 ntBASIC24.31■■□□□ 1.48
SLX4Q8IY92 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC24.31■■□□□ 1.48
SLX4Q8IY92 AC011298.2-201ENST00000617989 482 ntBASIC24.31■■□□□ 1.48
SLX4Q8IY92 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SLX4Q8IY92 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SLX4Q8IY92 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
SLX4Q8IY92 LSR-203ENST00000360798 1963 ntTSL 2 BASIC24.3■■□□□ 1.48
SLX4Q8IY92 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
SLX4Q8IY92 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC24.3■■□□□ 1.48
SLX4Q8IY92 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
SLX4Q8IY92 KRT126P-201ENST00000549467 1181 ntBASIC24.3■■□□□ 1.48
SLX4Q8IY92 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC24.3■■□□□ 1.48
SLX4Q8IY92 DBP-204ENST00000599385 709 ntTSL 3 BASIC24.3■■□□□ 1.48
SLX4Q8IY92 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SLX4Q8IY92 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
SLX4Q8IY92 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC24.3■■□□□ 1.48
SLX4Q8IY92 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SLX4Q8IY92 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC24.29■■□□□ 1.48
SLX4Q8IY92 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
SLX4Q8IY92 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SLX4Q8IY92 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC24.29■■□□□ 1.48
SLX4Q8IY92 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SLX4Q8IY92 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC24.29■■□□□ 1.48
SLX4Q8IY92 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SLX4Q8IY92 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SLX4Q8IY92 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC24.29■■□□□ 1.48
SLX4Q8IY92 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC24.29■■□□□ 1.48
SLX4Q8IY92 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SLX4Q8IY92 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SLX4Q8IY92 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
SLX4Q8IY92 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SLX4Q8IY92 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SLX4Q8IY92 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC24.28■■□□□ 1.48
SLX4Q8IY92 BET1L-202ENST00000332865 533 ntTSL 5 BASIC24.28■■□□□ 1.48
SLX4Q8IY92 PCED1CP-201ENST00000419887 785 ntBASIC24.28■■□□□ 1.48
SLX4Q8IY92 TSPY5P-201ENST00000426936 936 ntBASIC24.28■■□□□ 1.48
SLX4Q8IY92 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC24.28■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms