Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NUDCD3Q8IVD9 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NUDCD3Q8IVD9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NUDCD3Q8IVD9 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.69■□□□□ 0.74
NUDCD3Q8IVD9 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
NUDCD3Q8IVD9 AC093503.3-201ENST00000624917 2352 ntBASIC19.69■□□□□ 0.74
NUDCD3Q8IVD9 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
NUDCD3Q8IVD9 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NUDCD3Q8IVD9 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.68■□□□□ 0.74
NUDCD3Q8IVD9 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUDCD3Q8IVD9 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUDCD3Q8IVD9 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUDCD3Q8IVD9 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUDCD3Q8IVD9 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUDCD3Q8IVD9 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.68■□□□□ 0.74
NUDCD3Q8IVD9 AC097381.1-201ENST00000429019 1296 ntBASIC19.68■□□□□ 0.74
NUDCD3Q8IVD9 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.68■□□□□ 0.74
NUDCD3Q8IVD9 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NUDCD3Q8IVD9 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.68■□□□□ 0.74
NUDCD3Q8IVD9 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
NUDCD3Q8IVD9 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUDCD3Q8IVD9 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUDCD3Q8IVD9 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NUDCD3Q8IVD9 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUDCD3Q8IVD9 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
NUDCD3Q8IVD9 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
NUDCD3Q8IVD9 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.68■□□□□ 0.74
NUDCD3Q8IVD9 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUDCD3Q8IVD9 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
NUDCD3Q8IVD9 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
NUDCD3Q8IVD9 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
NUDCD3Q8IVD9 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NUDCD3Q8IVD9 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.67■□□□□ 0.74
NUDCD3Q8IVD9 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUDCD3Q8IVD9 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUDCD3Q8IVD9 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NUDCD3Q8IVD9 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NUDCD3Q8IVD9 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
NUDCD3Q8IVD9 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
NUDCD3Q8IVD9 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUDCD3Q8IVD9 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.67■□□□□ 0.74
NUDCD3Q8IVD9 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUDCD3Q8IVD9 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUDCD3Q8IVD9 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUDCD3Q8IVD9 AC019069.1-201ENST00000610008 1333 ntBASIC19.67■□□□□ 0.74
NUDCD3Q8IVD9 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUDCD3Q8IVD9 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUDCD3Q8IVD9 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
NUDCD3Q8IVD9 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NUDCD3Q8IVD9 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUDCD3Q8IVD9 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUDCD3Q8IVD9 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUDCD3Q8IVD9 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.66■□□□□ 0.74
NUDCD3Q8IVD9 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUDCD3Q8IVD9 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUDCD3Q8IVD9 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUDCD3Q8IVD9 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NUDCD3Q8IVD9 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.66■□□□□ 0.74
NUDCD3Q8IVD9 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUDCD3Q8IVD9 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.66■□□□□ 0.74
NUDCD3Q8IVD9 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.66■□□□□ 0.74
NUDCD3Q8IVD9 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
NUDCD3Q8IVD9 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.66■□□□□ 0.74
NUDCD3Q8IVD9 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUDCD3Q8IVD9 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NUDCD3Q8IVD9 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.66■□□□□ 0.74
NUDCD3Q8IVD9 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.66■□□□□ 0.74
NUDCD3Q8IVD9 AC142381.2-201ENST00000566120 298 ntBASIC19.66■□□□□ 0.74
NUDCD3Q8IVD9 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.66■□□□□ 0.74
NUDCD3Q8IVD9 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NUDCD3Q8IVD9 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.66■□□□□ 0.74
NUDCD3Q8IVD9 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NUDCD3Q8IVD9 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NUDCD3Q8IVD9 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NUDCD3Q8IVD9 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.66■□□□□ 0.74
NUDCD3Q8IVD9 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
NUDCD3Q8IVD9 AC087633.2-202ENST00000565166 1439 ntBASIC19.66■□□□□ 0.74
NUDCD3Q8IVD9 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
NUDCD3Q8IVD9 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
NUDCD3Q8IVD9 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.66■□□□□ 0.74
NUDCD3Q8IVD9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUDCD3Q8IVD9 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUDCD3Q8IVD9 AL032819.2-201ENST00000624543 2162 ntBASIC19.66■□□□□ 0.74
NUDCD3Q8IVD9 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUDCD3Q8IVD9 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUDCD3Q8IVD9 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUDCD3Q8IVD9 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
NUDCD3Q8IVD9 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUDCD3Q8IVD9 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUDCD3Q8IVD9 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUDCD3Q8IVD9 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUDCD3Q8IVD9 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
NUDCD3Q8IVD9 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUDCD3Q8IVD9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.65■□□□□ 0.74
NUDCD3Q8IVD9 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUDCD3Q8IVD9 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.65■□□□□ 0.74
NUDCD3Q8IVD9 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
NUDCD3Q8IVD9 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.65■□□□□ 0.74
NUDCD3Q8IVD9 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NUDCD3Q8IVD9 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms