Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHFQ7M4L6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SHFQ7M4L6 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.9■□□□□ 0.46
SHFQ7M4L6 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHFQ7M4L6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.9■□□□□ 0.46
SHFQ7M4L6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SHFQ7M4L6 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SHFQ7M4L6 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SHFQ7M4L6 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SHFQ7M4L6 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHFQ7M4L6 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
SHFQ7M4L6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
SHFQ7M4L6 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.89■□□□□ 0.46
SHFQ7M4L6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
SHFQ7M4L6 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHFQ7M4L6 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SHFQ7M4L6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SHFQ7M4L6 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SHFQ7M4L6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.89■□□□□ 0.45
SHFQ7M4L6 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.89■□□□□ 0.45
SHFQ7M4L6 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SHFQ7M4L6 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.89■□□□□ 0.45
SHFQ7M4L6 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHFQ7M4L6 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHFQ7M4L6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.89■□□□□ 0.45
SHFQ7M4L6 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHFQ7M4L6 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
SHFQ7M4L6 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHFQ7M4L6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.89■□□□□ 0.45
SHFQ7M4L6 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.89■□□□□ 0.45
SHFQ7M4L6 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SHFQ7M4L6 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHFQ7M4L6 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.89■□□□□ 0.45
SHFQ7M4L6 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHFQ7M4L6 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHFQ7M4L6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHFQ7M4L6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
SHFQ7M4L6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SHFQ7M4L6 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHFQ7M4L6 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHFQ7M4L6 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHFQ7M4L6 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHFQ7M4L6 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
SHFQ7M4L6 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHFQ7M4L6 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.88■□□□□ 0.45
SHFQ7M4L6 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHFQ7M4L6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHFQ7M4L6 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHFQ7M4L6 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHFQ7M4L6 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.88■□□□□ 0.45
SHFQ7M4L6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHFQ7M4L6 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.88■□□□□ 0.45
SHFQ7M4L6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.88■□□□□ 0.45
SHFQ7M4L6 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHFQ7M4L6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
SHFQ7M4L6 MYCNOS-205ENST00000641950 531 ntBASIC17.88■□□□□ 0.45
SHFQ7M4L6 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SHFQ7M4L6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.88■□□□□ 0.45
SHFQ7M4L6 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.88■□□□□ 0.45
SHFQ7M4L6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.88■□□□□ 0.45
SHFQ7M4L6 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.88■□□□□ 0.45
SHFQ7M4L6 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHFQ7M4L6 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHFQ7M4L6 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.88■□□□□ 0.45
SHFQ7M4L6 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SHFQ7M4L6 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SHFQ7M4L6 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.87■□□□□ 0.45
SHFQ7M4L6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SHFQ7M4L6 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.87■□□□□ 0.45
SHFQ7M4L6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHFQ7M4L6 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SHFQ7M4L6 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.87■□□□□ 0.45
SHFQ7M4L6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SHFQ7M4L6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHFQ7M4L6 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SHFQ7M4L6 ZNRF2P3-201ENST00000424200 374 ntBASIC17.87■□□□□ 0.45
SHFQ7M4L6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.87■□□□□ 0.45
SHFQ7M4L6 UBE2DNL-204ENST00000602536 740 ntBASIC17.87■□□□□ 0.45
SHFQ7M4L6 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHFQ7M4L6 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHFQ7M4L6 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SHFQ7M4L6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SHFQ7M4L6 AC138932.1-201ENST00000534164 6830 ntBASIC17.87■□□□□ 0.45
SHFQ7M4L6 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHFQ7M4L6 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SHFQ7M4L6 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHFQ7M4L6 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHFQ7M4L6 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHFQ7M4L6 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SHFQ7M4L6 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHFQ7M4L6 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHFQ7M4L6 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHFQ7M4L6 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.86■□□□□ 0.45
SHFQ7M4L6 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHFQ7M4L6 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHFQ7M4L6 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHFQ7M4L6 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SHFQ7M4L6 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHFQ7M4L6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.86■□□□□ 0.45
SHFQ7M4L6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms