Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.24■□□□□ 0.51
TUBA1AQ71U36 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TUBA1AQ71U36 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.24■□□□□ 0.51
TUBA1AQ71U36 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TUBA1AQ71U36 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
TUBA1AQ71U36 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TUBA1AQ71U36 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TUBA1AQ71U36 AC090192.1-201ENST00000517740 490 ntBASIC18.24■□□□□ 0.51
TUBA1AQ71U36 DUX4L16-201ENST00000555130 1264 ntBASIC18.24■□□□□ 0.51
TUBA1AQ71U36 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.24■□□□□ 0.51
TUBA1AQ71U36 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
TUBA1AQ71U36 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TUBA1AQ71U36 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.24■□□□□ 0.51
TUBA1AQ71U36 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.24■□□□□ 0.51
TUBA1AQ71U36 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TUBA1AQ71U36 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
TUBA1AQ71U36 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.24■□□□□ 0.51
TUBA1AQ71U36 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TUBA1AQ71U36 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TUBA1AQ71U36 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TUBA1AQ71U36 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBA1AQ71U36 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.23■□□□□ 0.51
TUBA1AQ71U36 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.23■□□□□ 0.51
TUBA1AQ71U36 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TUBA1AQ71U36 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBA1AQ71U36 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.23■□□□□ 0.51
TUBA1AQ71U36 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBA1AQ71U36 AC093503.3-201ENST00000624917 2352 ntBASIC18.23■□□□□ 0.51
TUBA1AQ71U36 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBA1AQ71U36 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TUBA1AQ71U36 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
TUBA1AQ71U36 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.23■□□□□ 0.51
TUBA1AQ71U36 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TUBA1AQ71U36 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.23■□□□□ 0.51
TUBA1AQ71U36 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBA1AQ71U36 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.23■□□□□ 0.51
TUBA1AQ71U36 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBA1AQ71U36 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBA1AQ71U36 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.23■□□□□ 0.51
TUBA1AQ71U36 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.23■□□□□ 0.51
TUBA1AQ71U36 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.23■□□□□ 0.51
TUBA1AQ71U36 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBA1AQ71U36 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBA1AQ71U36 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBA1AQ71U36 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBA1AQ71U36 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.23■□□□□ 0.51
TUBA1AQ71U36 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TUBA1AQ71U36 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBA1AQ71U36 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.23■□□□□ 0.51
TUBA1AQ71U36 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.23■□□□□ 0.51
TUBA1AQ71U36 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBA1AQ71U36 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
TUBA1AQ71U36 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBA1AQ71U36 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.23■□□□□ 0.51
TUBA1AQ71U36 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TUBA1AQ71U36 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBA1AQ71U36 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
TUBA1AQ71U36 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TUBA1AQ71U36 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TUBA1AQ71U36 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TUBA1AQ71U36 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TUBA1AQ71U36 AC092720.2-201ENST00000602388 1665 ntBASIC18.22■□□□□ 0.51
TUBA1AQ71U36 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TUBA1AQ71U36 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TUBA1AQ71U36 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TUBA1AQ71U36 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TUBA1AQ71U36 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.22■□□□□ 0.51
TUBA1AQ71U36 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.22■□□□□ 0.51
TUBA1AQ71U36 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.22■□□□□ 0.51
TUBA1AQ71U36 SLC7A5P1-201ENST00000568957 537 ntBASIC18.22■□□□□ 0.51
TUBA1AQ71U36 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TUBA1AQ71U36 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TUBA1AQ71U36 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TUBA1AQ71U36 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TUBA1AQ71U36 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TUBA1AQ71U36 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TUBA1AQ71U36 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TUBA1AQ71U36 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TUBA1AQ71U36 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TUBA1AQ71U36 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TUBA1AQ71U36 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TUBA1AQ71U36 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.21■□□□□ 0.51
TUBA1AQ71U36 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBA1AQ71U36 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.21■□□□□ 0.51
TUBA1AQ71U36 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBA1AQ71U36 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBA1AQ71U36 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TUBA1AQ71U36 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBA1AQ71U36 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBA1AQ71U36 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBA1AQ71U36 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.21■□□□□ 0.51
TUBA1AQ71U36 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TUBA1AQ71U36 TERF1P5-201ENST00000477545 1207 ntBASIC18.21■□□□□ 0.51
TUBA1AQ71U36 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBA1AQ71U36 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
TUBA1AQ71U36 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBA1AQ71U36 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TUBA1AQ71U36 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBA1AQ71U36 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TUBA1AQ71U36 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms