Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 CR392000.1-201ENST00000624770 1228 ntBASIC20.91■□□□□ 0.94
CCDC149Q6ZUS6 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC149Q6ZUS6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC149Q6ZUS6 AC005229.4-201ENST00000610085 2198 ntBASIC20.9■□□□□ 0.94
CCDC149Q6ZUS6 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC149Q6ZUS6 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CCDC149Q6ZUS6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC149Q6ZUS6 DPP3P2-201ENST00000416030 1696 ntBASIC20.9■□□□□ 0.94
CCDC149Q6ZUS6 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC149Q6ZUS6 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC149Q6ZUS6 KRT16P1-201ENST00000399124 1418 ntBASIC20.9■□□□□ 0.94
CCDC149Q6ZUS6 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC149Q6ZUS6 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC149Q6ZUS6 AL137013.1-201ENST00000432946 1228 ntBASIC20.9■□□□□ 0.94
CCDC149Q6ZUS6 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC149Q6ZUS6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC149Q6ZUS6 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC149Q6ZUS6 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CCDC149Q6ZUS6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC149Q6ZUS6 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC149Q6ZUS6 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CCDC149Q6ZUS6 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC149Q6ZUS6 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC149Q6ZUS6 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CCDC149Q6ZUS6 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC149Q6ZUS6 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC149Q6ZUS6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC149Q6ZUS6 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CCDC149Q6ZUS6 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC149Q6ZUS6 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC149Q6ZUS6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC149Q6ZUS6 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC149Q6ZUS6 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC149Q6ZUS6 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC149Q6ZUS6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC149Q6ZUS6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
CCDC149Q6ZUS6 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC149Q6ZUS6 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.89■□□□□ 0.93
CCDC149Q6ZUS6 AL390955.1-201ENST00000428694 934 ntBASIC20.89■□□□□ 0.93
CCDC149Q6ZUS6 FITM1-202ENST00000559294 800 ntBASIC20.89■□□□□ 0.93
CCDC149Q6ZUS6 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.89■□□□□ 0.93
CCDC149Q6ZUS6 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
CCDC149Q6ZUS6 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC149Q6ZUS6 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC149Q6ZUS6 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC149Q6ZUS6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC149Q6ZUS6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC149Q6ZUS6 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC149Q6ZUS6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC149Q6ZUS6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC149Q6ZUS6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CCDC149Q6ZUS6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC149Q6ZUS6 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC149Q6ZUS6 TERF1P1-201ENST00000311003 1181 ntBASIC20.88■□□□□ 0.93
CCDC149Q6ZUS6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC149Q6ZUS6 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC149Q6ZUS6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CCDC149Q6ZUS6 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.88■□□□□ 0.93
CCDC149Q6ZUS6 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC149Q6ZUS6 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CCDC149Q6ZUS6 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
CCDC149Q6ZUS6 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC149Q6ZUS6 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC149Q6ZUS6 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CCDC149Q6ZUS6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
CCDC149Q6ZUS6 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC149Q6ZUS6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC149Q6ZUS6 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC149Q6ZUS6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC149Q6ZUS6 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC149Q6ZUS6 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CCDC149Q6ZUS6 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC149Q6ZUS6 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC149Q6ZUS6 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC149Q6ZUS6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.87■□□□□ 0.93
CCDC149Q6ZUS6 AC116562.2-201ENST00000507042 360 ntBASIC20.87■□□□□ 0.93
CCDC149Q6ZUS6 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC149Q6ZUS6 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.87■□□□□ 0.93
CCDC149Q6ZUS6 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.87■□□□□ 0.93
CCDC149Q6ZUS6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.87■□□□□ 0.93
CCDC149Q6ZUS6 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC149Q6ZUS6 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC149Q6ZUS6 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.87■□□□□ 0.93
CCDC149Q6ZUS6 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC149Q6ZUS6 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC149Q6ZUS6 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC149Q6ZUS6 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC149Q6ZUS6 AF106564.1-201ENST00000607058 2553 ntBASIC20.86■□□□□ 0.93
CCDC149Q6ZUS6 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC149Q6ZUS6 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC149Q6ZUS6 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.86■□□□□ 0.93
CCDC149Q6ZUS6 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC149Q6ZUS6 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC149Q6ZUS6 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC149Q6ZUS6 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
CCDC149Q6ZUS6 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CCDC149Q6ZUS6 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC149Q6ZUS6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC149Q6ZUS6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC149Q6ZUS6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms