Protein–RNA interactions for Protein: Q6ZUF6

LINC00336, Putative uncharacterized protein encoded by LINC00336, humanhuman

Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336Q6ZUF6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00336Q6ZUF6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
LINC00336Q6ZUF6 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LINC00336Q6ZUF6 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC13.33□□□□□ -0.27
LINC00336Q6ZUF6 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC13.33□□□□□ -0.27
LINC00336Q6ZUF6 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
LINC00336Q6ZUF6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
LINC00336Q6ZUF6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
LINC00336Q6ZUF6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
LINC00336Q6ZUF6 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00336Q6ZUF6 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00336Q6ZUF6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC00336Q6ZUF6 NIFKP9-201ENST00000419265 221 ntBASIC13.33□□□□□ -0.28
LINC00336Q6ZUF6 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC00336Q6ZUF6 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00336Q6ZUF6 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00336Q6ZUF6 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.33□□□□□ -0.28
LINC00336Q6ZUF6 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00336Q6ZUF6 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC13.33□□□□□ -0.28
LINC00336Q6ZUF6 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC13.33□□□□□ -0.28
LINC00336Q6ZUF6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LINC00336Q6ZUF6 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC13.33□□□□□ -0.28
LINC00336Q6ZUF6 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC00336Q6ZUF6 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC00336Q6ZUF6 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
LINC00336Q6ZUF6 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00336Q6ZUF6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00336Q6ZUF6 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00336Q6ZUF6 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00336Q6ZUF6 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00336Q6ZUF6 PODN-203ENST00000395871 2744 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC00336Q6ZUF6 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00336Q6ZUF6 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00336Q6ZUF6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
LINC00336Q6ZUF6 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00336Q6ZUF6 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00336Q6ZUF6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
LINC00336Q6ZUF6 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
LINC00336Q6ZUF6 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00336Q6ZUF6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
LINC00336Q6ZUF6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00336Q6ZUF6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
LINC00336Q6ZUF6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC00336Q6ZUF6 BX664615.1-201ENST00000443558 458 ntBASIC13.32□□□□□ -0.28
LINC00336Q6ZUF6 EGLN1P1-201ENST00000531623 762 ntBASIC13.32□□□□□ -0.28
LINC00336Q6ZUF6 PNN-205ENST00000556530 601 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00336Q6ZUF6 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
LINC00336Q6ZUF6 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
LINC00336Q6ZUF6 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC13.32□□□□□ -0.28
LINC00336Q6ZUF6 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00336Q6ZUF6 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00336Q6ZUF6 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
LINC00336Q6ZUF6 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00336Q6ZUF6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00336Q6ZUF6 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00336Q6ZUF6 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00336Q6ZUF6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00336Q6ZUF6 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00336Q6ZUF6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00336Q6ZUF6 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
LINC00336Q6ZUF6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00336Q6ZUF6 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00336Q6ZUF6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00336Q6ZUF6 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
LINC00336Q6ZUF6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00336Q6ZUF6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00336Q6ZUF6 AC027702.1-201ENST00000563810 1770 ntBASIC13.31□□□□□ -0.28
LINC00336Q6ZUF6 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00336Q6ZUF6 AL390955.1-201ENST00000428694 934 ntBASIC13.31□□□□□ -0.28
LINC00336Q6ZUF6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC13.31□□□□□ -0.28
LINC00336Q6ZUF6 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC13.31□□□□□ -0.28
LINC00336Q6ZUF6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00336Q6ZUF6 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC13.31□□□□□ -0.28
LINC00336Q6ZUF6 WWOX-216ENST00000569818 525 ntBASIC13.31□□□□□ -0.28
LINC00336Q6ZUF6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
LINC00336Q6ZUF6 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00336Q6ZUF6 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00336Q6ZUF6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00336Q6ZUF6 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00336Q6ZUF6 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00336Q6ZUF6 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00336Q6ZUF6 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00336Q6ZUF6 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00336Q6ZUF6 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00336Q6ZUF6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00336Q6ZUF6 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00336Q6ZUF6 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00336Q6ZUF6 FSCN1P1-201ENST00000568912 1481 ntBASIC13.3□□□□□ -0.28
LINC00336Q6ZUF6 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00336Q6ZUF6 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00336Q6ZUF6 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00336Q6ZUF6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00336Q6ZUF6 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC13.3□□□□□ -0.28
LINC00336Q6ZUF6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00336Q6ZUF6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC13.3□□□□□ -0.28
LINC00336Q6ZUF6 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00336Q6ZUF6 COPE-203ENST00000351079 907 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC00336Q6ZUF6 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00336Q6ZUF6 TPM4P1-201ENST00000436100 807 ntBASIC13.3□□□□□ -0.28
LINC00336Q6ZUF6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms