Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.03■□□□□ 0.8
PACS1Q6VY07 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PACS1Q6VY07 TREX1-205ENST00000625293 1783 ntBASIC20.03■□□□□ 0.8
PACS1Q6VY07 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.03■□□□□ 0.8
PACS1Q6VY07 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PACS1Q6VY07 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PACS1Q6VY07 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PACS1Q6VY07 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.03■□□□□ 0.8
PACS1Q6VY07 AC087289.5-201ENST00000586076 3175 ntBASIC20.03■□□□□ 0.8
PACS1Q6VY07 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PACS1Q6VY07 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.03■□□□□ 0.8
PACS1Q6VY07 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.03■□□□□ 0.8
PACS1Q6VY07 TSPY6P-201ENST00000448518 926 ntBASIC20.03■□□□□ 0.8
PACS1Q6VY07 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.03■□□□□ 0.8
PACS1Q6VY07 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PACS1Q6VY07 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.03■□□□□ 0.8
PACS1Q6VY07 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.03■□□□□ 0.8
PACS1Q6VY07 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PACS1Q6VY07 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PACS1Q6VY07 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PACS1Q6VY07 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.02■□□□□ 0.8
PACS1Q6VY07 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
PACS1Q6VY07 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PACS1Q6VY07 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PACS1Q6VY07 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.02■□□□□ 0.8
PACS1Q6VY07 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PACS1Q6VY07 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PACS1Q6VY07 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PACS1Q6VY07 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PACS1Q6VY07 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.02■□□□□ 0.8
PACS1Q6VY07 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PACS1Q6VY07 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.02■□□□□ 0.8
PACS1Q6VY07 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.02■□□□□ 0.8
PACS1Q6VY07 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.02■□□□□ 0.8
PACS1Q6VY07 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.02■□□□□ 0.8
PACS1Q6VY07 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.02■□□□□ 0.8
PACS1Q6VY07 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PACS1Q6VY07 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.02■□□□□ 0.79
PACS1Q6VY07 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
PACS1Q6VY07 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
PACS1Q6VY07 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.02■□□□□ 0.79
PACS1Q6VY07 PTBP1P-201ENST00000554374 1601 ntBASIC20.02■□□□□ 0.79
PACS1Q6VY07 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PACS1Q6VY07 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PACS1Q6VY07 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.01■□□□□ 0.79
PACS1Q6VY07 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PACS1Q6VY07 LSM12P1-201ENST00000411836 588 ntBASIC20.01■□□□□ 0.79
PACS1Q6VY07 BX276092.2-201ENST00000417668 665 ntBASIC20.01■□□□□ 0.79
PACS1Q6VY07 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.01■□□□□ 0.79
PACS1Q6VY07 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
PACS1Q6VY07 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PACS1Q6VY07 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.01■□□□□ 0.79
PACS1Q6VY07 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.01■□□□□ 0.79
PACS1Q6VY07 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.01■□□□□ 0.79
PACS1Q6VY07 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PACS1Q6VY07 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
PACS1Q6VY07 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PACS1Q6VY07 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20■□□□□ 0.79
PACS1Q6VY07 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PACS1Q6VY07 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20■□□□□ 0.79
PACS1Q6VY07 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PACS1Q6VY07 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PACS1Q6VY07 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PACS1Q6VY07 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20■□□□□ 0.79
PACS1Q6VY07 SLC29A4P1-201ENST00000398760 971 ntBASIC20■□□□□ 0.79
PACS1Q6VY07 MIPEPP3-201ENST00000412105 444 ntBASIC20■□□□□ 0.79
PACS1Q6VY07 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20■□□□□ 0.79
PACS1Q6VY07 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20■□□□□ 0.79
PACS1Q6VY07 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20■□□□□ 0.79
PACS1Q6VY07 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
PACS1Q6VY07 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20■□□□□ 0.79
PACS1Q6VY07 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20■□□□□ 0.79
PACS1Q6VY07 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PACS1Q6VY07 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PACS1Q6VY07 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PACS1Q6VY07 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PACS1Q6VY07 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
PACS1Q6VY07 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PACS1Q6VY07 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PACS1Q6VY07 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PACS1Q6VY07 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PACS1Q6VY07 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.99■□□□□ 0.79
PACS1Q6VY07 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.99■□□□□ 0.79
PACS1Q6VY07 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PACS1Q6VY07 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.99■□□□□ 0.79
PACS1Q6VY07 AC092118.2-201ENST00000613495 667 ntBASIC19.99■□□□□ 0.79
PACS1Q6VY07 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.99■□□□□ 0.79
PACS1Q6VY07 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.99■□□□□ 0.79
PACS1Q6VY07 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
PACS1Q6VY07 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PACS1Q6VY07 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.98■□□□□ 0.79
PACS1Q6VY07 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PACS1Q6VY07 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PACS1Q6VY07 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PACS1Q6VY07 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PACS1Q6VY07 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.98■□□□□ 0.79
PACS1Q6VY07 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
PACS1Q6VY07 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PACS1Q6VY07 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PACS1Q6VY07 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms