Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC27A1Q6PCB7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.52■■□□□ 1.04
SLC27A1Q6PCB7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC27A1Q6PCB7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
SLC27A1Q6PCB7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SLC27A1Q6PCB7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
SLC27A1Q6PCB7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC27A1Q6PCB7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.52■■□□□ 1.04
SLC27A1Q6PCB7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.52■■□□□ 1.04
SLC27A1Q6PCB7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.52■■□□□ 1.04
SLC27A1Q6PCB7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.52■■□□□ 1.04
SLC27A1Q6PCB7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.52■■□□□ 1.04
SLC27A1Q6PCB7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SLC27A1Q6PCB7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC27A1Q6PCB7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.52■■□□□ 1.04
SLC27A1Q6PCB7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC27A1Q6PCB7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC27A1Q6PCB7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
SLC27A1Q6PCB7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
SLC27A1Q6PCB7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.03
SLC27A1Q6PCB7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SLC27A1Q6PCB7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SLC27A1Q6PCB7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SLC27A1Q6PCB7 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC27A1Q6PCB7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC27A1Q6PCB7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.51■■□□□ 1.03
SLC27A1Q6PCB7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SLC27A1Q6PCB7 YBX1P10-201ENST00000444752 975 ntBASIC21.51■■□□□ 1.03
SLC27A1Q6PCB7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.51■■□□□ 1.03
SLC27A1Q6PCB7 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.51■■□□□ 1.03
SLC27A1Q6PCB7 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.51■■□□□ 1.03
SLC27A1Q6PCB7 AL353708.3-201ENST00000610272 989 ntBASIC21.51■■□□□ 1.03
SLC27A1Q6PCB7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC27A1Q6PCB7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC27A1Q6PCB7 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.51■■□□□ 1.03
SLC27A1Q6PCB7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SLC27A1Q6PCB7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC27A1Q6PCB7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC27A1Q6PCB7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.51■■□□□ 1.03
SLC27A1Q6PCB7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SLC27A1Q6PCB7 FEM1AP1-201ENST00000431297 1995 ntBASIC21.5■■□□□ 1.03
SLC27A1Q6PCB7 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC27A1Q6PCB7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC27A1Q6PCB7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SLC27A1Q6PCB7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SLC27A1Q6PCB7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC27A1Q6PCB7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SLC27A1Q6PCB7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC27A1Q6PCB7 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC27A1Q6PCB7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC27A1Q6PCB7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SLC27A1Q6PCB7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.5■■□□□ 1.03
SLC27A1Q6PCB7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SLC27A1Q6PCB7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
SLC27A1Q6PCB7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SLC27A1Q6PCB7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SLC27A1Q6PCB7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC27A1Q6PCB7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SLC27A1Q6PCB7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.5■■□□□ 1.03
SLC27A1Q6PCB7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.5■■□□□ 1.03
SLC27A1Q6PCB7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.5■■□□□ 1.03
SLC27A1Q6PCB7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
SLC27A1Q6PCB7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SLC27A1Q6PCB7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
SLC27A1Q6PCB7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
SLC27A1Q6PCB7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC27A1Q6PCB7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC27A1Q6PCB7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
SLC27A1Q6PCB7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SLC27A1Q6PCB7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC27A1Q6PCB7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
SLC27A1Q6PCB7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC27A1Q6PCB7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SLC27A1Q6PCB7 AP002982.1-201ENST00000492365 877 ntBASIC21.49■■□□□ 1.03
SLC27A1Q6PCB7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SLC27A1Q6PCB7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.49■■□□□ 1.03
SLC27A1Q6PCB7 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.49■■□□□ 1.03
SLC27A1Q6PCB7 CD177P1-201ENST00000606252 935 ntBASIC21.49■■□□□ 1.03
SLC27A1Q6PCB7 AC073195.1-201ENST00000607241 877 ntBASIC21.49■■□□□ 1.03
SLC27A1Q6PCB7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
SLC27A1Q6PCB7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.49■■□□□ 1.03
SLC27A1Q6PCB7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC27A1Q6PCB7 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC27A1Q6PCB7 AL512408.1-201ENST00000569378 2000 ntBASIC21.48■■□□□ 1.03
SLC27A1Q6PCB7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.48■■□□□ 1.03
SLC27A1Q6PCB7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SLC27A1Q6PCB7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC27A1Q6PCB7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC27A1Q6PCB7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC27A1Q6PCB7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.48■■□□□ 1.03
SLC27A1Q6PCB7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC27A1Q6PCB7 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
SLC27A1Q6PCB7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SLC27A1Q6PCB7 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.48■■□□□ 1.03
SLC27A1Q6PCB7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SLC27A1Q6PCB7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC27A1Q6PCB7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC27A1Q6PCB7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.47■■□□□ 1.03
SLC27A1Q6PCB7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC27A1Q6PCB7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms