Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.68■□□□□ 0.9
TTC39BQ5VTQ0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
TTC39BQ5VTQ0 PTBP1P-201ENST00000554374 1601 ntBASIC20.67■□□□□ 0.9
TTC39BQ5VTQ0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
TTC39BQ5VTQ0 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TTC39BQ5VTQ0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TTC39BQ5VTQ0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.67■□□□□ 0.9
TTC39BQ5VTQ0 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TTC39BQ5VTQ0 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TTC39BQ5VTQ0 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TTC39BQ5VTQ0 KRT18P29-201ENST00000397031 1267 ntBASIC20.67■□□□□ 0.9
TTC39BQ5VTQ0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.67■□□□□ 0.9
TTC39BQ5VTQ0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TTC39BQ5VTQ0 AC006058.3-201ENST00000606217 1069 ntBASIC20.67■□□□□ 0.9
TTC39BQ5VTQ0 AL031963.3-201ENST00000606441 850 ntBASIC20.67■□□□□ 0.9
TTC39BQ5VTQ0 TMEM191A-211ENST00000637163 1067 ntBASIC20.67■□□□□ 0.9
TTC39BQ5VTQ0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TTC39BQ5VTQ0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TTC39BQ5VTQ0 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TTC39BQ5VTQ0 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TTC39BQ5VTQ0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TTC39BQ5VTQ0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TTC39BQ5VTQ0 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TTC39BQ5VTQ0 AC112907.3-201ENST00000577781 2400 ntBASIC20.66■□□□□ 0.9
TTC39BQ5VTQ0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TTC39BQ5VTQ0 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TTC39BQ5VTQ0 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TTC39BQ5VTQ0 KRT17P3-201ENST00000420566 1262 ntBASIC20.66■□□□□ 0.9
TTC39BQ5VTQ0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.66■□□□□ 0.9
TTC39BQ5VTQ0 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TTC39BQ5VTQ0 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TTC39BQ5VTQ0 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TTC39BQ5VTQ0 KRT8P20-201ENST00000423953 1409 ntBASIC20.66■□□□□ 0.9
TTC39BQ5VTQ0 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TTC39BQ5VTQ0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
TTC39BQ5VTQ0 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TTC39BQ5VTQ0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
TTC39BQ5VTQ0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TTC39BQ5VTQ0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.66■□□□□ 0.9
TTC39BQ5VTQ0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.66■□□□□ 0.9
TTC39BQ5VTQ0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TTC39BQ5VTQ0 AC099778.1-201ENST00000568593 1911 ntBASIC20.66■□□□□ 0.9
TTC39BQ5VTQ0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TTC39BQ5VTQ0 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TTC39BQ5VTQ0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TTC39BQ5VTQ0 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TTC39BQ5VTQ0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.65■□□□□ 0.9
TTC39BQ5VTQ0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TTC39BQ5VTQ0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TTC39BQ5VTQ0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.65■□□□□ 0.9
TTC39BQ5VTQ0 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TTC39BQ5VTQ0 POM121L13P-201ENST00000422362 380 ntBASIC20.65■□□□□ 0.9
TTC39BQ5VTQ0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TTC39BQ5VTQ0 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.65■□□□□ 0.9
TTC39BQ5VTQ0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.65■□□□□ 0.9
TTC39BQ5VTQ0 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.65■□□□□ 0.9
TTC39BQ5VTQ0 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.65■□□□□ 0.9
TTC39BQ5VTQ0 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TTC39BQ5VTQ0 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TTC39BQ5VTQ0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
TTC39BQ5VTQ0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
TTC39BQ5VTQ0 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TTC39BQ5VTQ0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TTC39BQ5VTQ0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TTC39BQ5VTQ0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TTC39BQ5VTQ0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.65■□□□□ 0.9
TTC39BQ5VTQ0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TTC39BQ5VTQ0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
TTC39BQ5VTQ0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.64■□□□□ 0.9
TTC39BQ5VTQ0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TTC39BQ5VTQ0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.64■□□□□ 0.9
TTC39BQ5VTQ0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.64■□□□□ 0.89
TTC39BQ5VTQ0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.64■□□□□ 0.89
TTC39BQ5VTQ0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TTC39BQ5VTQ0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TTC39BQ5VTQ0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TTC39BQ5VTQ0 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TTC39BQ5VTQ0 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TTC39BQ5VTQ0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.64■□□□□ 0.89
TTC39BQ5VTQ0 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TTC39BQ5VTQ0 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.64■□□□□ 0.89
TTC39BQ5VTQ0 AC006557.6-201ENST00000623071 864 ntBASIC20.64■□□□□ 0.89
TTC39BQ5VTQ0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
TTC39BQ5VTQ0 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TTC39BQ5VTQ0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TTC39BQ5VTQ0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.64■□□□□ 0.89
TTC39BQ5VTQ0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TTC39BQ5VTQ0 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TTC39BQ5VTQ0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.64■□□□□ 0.89
TTC39BQ5VTQ0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.64■□□□□ 0.89
TTC39BQ5VTQ0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.64■□□□□ 0.89
TTC39BQ5VTQ0 DPP3P2-201ENST00000416030 1696 ntBASIC20.64■□□□□ 0.89
TTC39BQ5VTQ0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.64■□□□□ 0.89
TTC39BQ5VTQ0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TTC39BQ5VTQ0 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.63■□□□□ 0.89
TTC39BQ5VTQ0 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.63■□□□□ 0.89
TTC39BQ5VTQ0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TTC39BQ5VTQ0 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.63■□□□□ 0.89
TTC39BQ5VTQ0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TTC39BQ5VTQ0 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms