Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATPAF1Q5TC12 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.18■□□□□ 0.34
ATPAF1Q5TC12 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATPAF1Q5TC12 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATPAF1Q5TC12 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATPAF1Q5TC12 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.17■□□□□ 0.34
ATPAF1Q5TC12 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATPAF1Q5TC12 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATPAF1Q5TC12 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATPAF1Q5TC12 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.17■□□□□ 0.34
ATPAF1Q5TC12 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATPAF1Q5TC12 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATPAF1Q5TC12 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATPAF1Q5TC12 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATPAF1Q5TC12 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATPAF1Q5TC12 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATPAF1Q5TC12 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
ATPAF1Q5TC12 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.17■□□□□ 0.34
ATPAF1Q5TC12 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATPAF1Q5TC12 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.17■□□□□ 0.34
ATPAF1Q5TC12 AL512625.2-201ENST00000417533 625 ntBASIC17.17■□□□□ 0.34
ATPAF1Q5TC12 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.17■□□□□ 0.34
ATPAF1Q5TC12 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATPAF1Q5TC12 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.17■□□□□ 0.34
ATPAF1Q5TC12 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.17■□□□□ 0.34
ATPAF1Q5TC12 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.17■□□□□ 0.34
ATPAF1Q5TC12 AC016405.3-201ENST00000607710 860 ntBASIC17.17■□□□□ 0.34
ATPAF1Q5TC12 AC008694.1-202ENST00000636953 945 ntBASIC17.17■□□□□ 0.34
ATPAF1Q5TC12 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.17■□□□□ 0.34
ATPAF1Q5TC12 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.17■□□□□ 0.34
ATPAF1Q5TC12 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATPAF1Q5TC12 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATPAF1Q5TC12 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATPAF1Q5TC12 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.16■□□□□ 0.34
ATPAF1Q5TC12 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.16■□□□□ 0.34
ATPAF1Q5TC12 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ATPAF1Q5TC12 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATPAF1Q5TC12 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.16■□□□□ 0.34
ATPAF1Q5TC12 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ATPAF1Q5TC12 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATPAF1Q5TC12 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.16■□□□□ 0.34
ATPAF1Q5TC12 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
ATPAF1Q5TC12 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
ATPAF1Q5TC12 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATPAF1Q5TC12 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ATPAF1Q5TC12 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.16■□□□□ 0.34
ATPAF1Q5TC12 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.16■□□□□ 0.34
ATPAF1Q5TC12 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATPAF1Q5TC12 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
ATPAF1Q5TC12 CYP2T1P-201ENST00000432607 1285 ntBASIC17.16■□□□□ 0.34
ATPAF1Q5TC12 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.16■□□□□ 0.34
ATPAF1Q5TC12 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.16■□□□□ 0.34
ATPAF1Q5TC12 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.16■□□□□ 0.34
ATPAF1Q5TC12 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
ATPAF1Q5TC12 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATPAF1Q5TC12 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.16■□□□□ 0.34
ATPAF1Q5TC12 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATPAF1Q5TC12 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATPAF1Q5TC12 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.16■□□□□ 0.34
ATPAF1Q5TC12 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ATPAF1Q5TC12 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ATPAF1Q5TC12 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATPAF1Q5TC12 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.16■□□□□ 0.34
ATPAF1Q5TC12 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATPAF1Q5TC12 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.15■□□□□ 0.34
ATPAF1Q5TC12 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATPAF1Q5TC12 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ATPAF1Q5TC12 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATPAF1Q5TC12 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATPAF1Q5TC12 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATPAF1Q5TC12 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
ATPAF1Q5TC12 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATPAF1Q5TC12 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATPAF1Q5TC12 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
ATPAF1Q5TC12 CROCCP5-201ENST00000436658 830 ntBASIC17.15■□□□□ 0.34
ATPAF1Q5TC12 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.15■□□□□ 0.34
ATPAF1Q5TC12 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ATPAF1Q5TC12 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
ATPAF1Q5TC12 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.15■□□□□ 0.34
ATPAF1Q5TC12 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATPAF1Q5TC12 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ATPAF1Q5TC12 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATPAF1Q5TC12 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ATPAF1Q5TC12 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATPAF1Q5TC12 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
ATPAF1Q5TC12 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.14■□□□□ 0.34
ATPAF1Q5TC12 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATPAF1Q5TC12 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATPAF1Q5TC12 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATPAF1Q5TC12 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATPAF1Q5TC12 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATPAF1Q5TC12 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATPAF1Q5TC12 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATPAF1Q5TC12 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.14■□□□□ 0.33
ATPAF1Q5TC12 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATPAF1Q5TC12 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATPAF1Q5TC12 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATPAF1Q5TC12 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATPAF1Q5TC12 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
ATPAF1Q5TC12 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms