Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00242Q5T6M2 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC13.56□□□□□ -0.24
LINC00242Q5T6M2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
LINC00242Q5T6M2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00242Q5T6M2 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC13.56□□□□□ -0.24
LINC00242Q5T6M2 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LINC00242Q5T6M2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
LINC00242Q5T6M2 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00242Q5T6M2 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC13.56□□□□□ -0.24
LINC00242Q5T6M2 SUDS3P1-201ENST00000505831 966 ntBASIC13.56□□□□□ -0.24
LINC00242Q5T6M2 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00242Q5T6M2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
LINC00242Q5T6M2 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00242Q5T6M2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
LINC00242Q5T6M2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00242Q5T6M2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00242Q5T6M2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00242Q5T6M2 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00242Q5T6M2 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00242Q5T6M2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC13.56□□□□□ -0.24
LINC00242Q5T6M2 LINC01465-201ENST00000408887 1940 ntBASIC13.56□□□□□ -0.24
LINC00242Q5T6M2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
LINC00242Q5T6M2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC13.56□□□□□ -0.24
LINC00242Q5T6M2 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00242Q5T6M2 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00242Q5T6M2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00242Q5T6M2 LINC02228-203ENST00000641970 1355 ntBASIC13.56□□□□□ -0.24
LINC00242Q5T6M2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00242Q5T6M2 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00242Q5T6M2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00242Q5T6M2 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00242Q5T6M2 AC087633.2-202ENST00000565166 1439 ntBASIC13.56□□□□□ -0.24
LINC00242Q5T6M2 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC00242Q5T6M2 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00242Q5T6M2 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00242Q5T6M2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00242Q5T6M2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00242Q5T6M2 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00242Q5T6M2 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00242Q5T6M2 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00242Q5T6M2 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00242Q5T6M2 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC13.55□□□□□ -0.24
LINC00242Q5T6M2 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00242Q5T6M2 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00242Q5T6M2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00242Q5T6M2 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00242Q5T6M2 AC027612.3-201ENST00000413684 1047 ntBASIC13.55□□□□□ -0.24
LINC00242Q5T6M2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC00242Q5T6M2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC13.55□□□□□ -0.24
LINC00242Q5T6M2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC00242Q5T6M2 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC13.55□□□□□ -0.24
LINC00242Q5T6M2 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC13.55□□□□□ -0.24
LINC00242Q5T6M2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC00242Q5T6M2 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00242Q5T6M2 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00242Q5T6M2 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00242Q5T6M2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC00242Q5T6M2 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00242Q5T6M2 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00242Q5T6M2 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00242Q5T6M2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00242Q5T6M2 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00242Q5T6M2 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00242Q5T6M2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00242Q5T6M2 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC00242Q5T6M2 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00242Q5T6M2 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00242Q5T6M2 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00242Q5T6M2 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00242Q5T6M2 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
LINC00242Q5T6M2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00242Q5T6M2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
LINC00242Q5T6M2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00242Q5T6M2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
LINC00242Q5T6M2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00242Q5T6M2 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00242Q5T6M2 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00242Q5T6M2 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
LINC00242Q5T6M2 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00242Q5T6M2 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00242Q5T6M2 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00242Q5T6M2 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00242Q5T6M2 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00242Q5T6M2 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC13.54□□□□□ -0.24
LINC00242Q5T6M2 TESC-206ENST00000541210 936 ntTSL 3 BASIC13.54□□□□□ -0.24
LINC00242Q5T6M2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC13.54□□□□□ -0.24
LINC00242Q5T6M2 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC00242Q5T6M2 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00242Q5T6M2 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
LINC00242Q5T6M2 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00242Q5T6M2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00242Q5T6M2 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00242Q5T6M2 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC13.54□□□□□ -0.24
LINC00242Q5T6M2 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00242Q5T6M2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00242Q5T6M2 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
LINC00242Q5T6M2 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC13.54□□□□□ -0.24
LINC00242Q5T6M2 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00242Q5T6M2 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC00242Q5T6M2 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms