Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FREM1Q5H8C1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.5■□□□□ 0.39
FREM1Q5H8C1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.5■□□□□ 0.39
FREM1Q5H8C1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.5■□□□□ 0.39
FREM1Q5H8C1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.5■□□□□ 0.39
FREM1Q5H8C1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
FREM1Q5H8C1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FREM1Q5H8C1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
FREM1Q5H8C1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FREM1Q5H8C1 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
FREM1Q5H8C1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.49■□□□□ 0.39
FREM1Q5H8C1 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.49■□□□□ 0.39
FREM1Q5H8C1 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
FREM1Q5H8C1 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
FREM1Q5H8C1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
FREM1Q5H8C1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
FREM1Q5H8C1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.49■□□□□ 0.39
FREM1Q5H8C1 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
FREM1Q5H8C1 LINC01521-201ENST00000504184 1943 ntBASIC17.49■□□□□ 0.39
FREM1Q5H8C1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.49■□□□□ 0.39
FREM1Q5H8C1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FREM1Q5H8C1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.49■□□□□ 0.39
FREM1Q5H8C1 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FREM1Q5H8C1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.49■□□□□ 0.39
FREM1Q5H8C1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FREM1Q5H8C1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.49■□□□□ 0.39
FREM1Q5H8C1 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.49■□□□□ 0.39
FREM1Q5H8C1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.49■□□□□ 0.39
FREM1Q5H8C1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.49■□□□□ 0.39
FREM1Q5H8C1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.49■□□□□ 0.39
FREM1Q5H8C1 AL353708.3-201ENST00000610272 989 ntBASIC17.49■□□□□ 0.39
FREM1Q5H8C1 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.48■□□□□ 0.39
FREM1Q5H8C1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
FREM1Q5H8C1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.48■□□□□ 0.39
FREM1Q5H8C1 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
FREM1Q5H8C1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
FREM1Q5H8C1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FREM1Q5H8C1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.48■□□□□ 0.39
FREM1Q5H8C1 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
FREM1Q5H8C1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
FREM1Q5H8C1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.48■□□□□ 0.39
FREM1Q5H8C1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
FREM1Q5H8C1 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FREM1Q5H8C1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.48■□□□□ 0.39
FREM1Q5H8C1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.48■□□□□ 0.39
FREM1Q5H8C1 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.48■□□□□ 0.39
FREM1Q5H8C1 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FREM1Q5H8C1 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
FREM1Q5H8C1 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.47■□□□□ 0.39
FREM1Q5H8C1 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FREM1Q5H8C1 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.47■□□□□ 0.39
FREM1Q5H8C1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FREM1Q5H8C1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FREM1Q5H8C1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.47■□□□□ 0.39
FREM1Q5H8C1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
FREM1Q5H8C1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FREM1Q5H8C1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FREM1Q5H8C1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FREM1Q5H8C1 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
FREM1Q5H8C1 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FREM1Q5H8C1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FREM1Q5H8C1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.47■□□□□ 0.39
FREM1Q5H8C1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
FREM1Q5H8C1 AC110285.5-201ENST00000611501 352 ntBASIC17.47■□□□□ 0.39
FREM1Q5H8C1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FREM1Q5H8C1 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FREM1Q5H8C1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FREM1Q5H8C1 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FREM1Q5H8C1 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FREM1Q5H8C1 NUDT16P1-203ENST00000513809 620 ntBASIC17.46■□□□□ 0.39
FREM1Q5H8C1 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.46■□□□□ 0.39
FREM1Q5H8C1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.46■□□□□ 0.39
FREM1Q5H8C1 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FREM1Q5H8C1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FREM1Q5H8C1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
FREM1Q5H8C1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.46■□□□□ 0.39
FREM1Q5H8C1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FREM1Q5H8C1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
FREM1Q5H8C1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
FREM1Q5H8C1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FREM1Q5H8C1 PHGDH-210ENST00000641115 1638 ntBASIC17.46■□□□□ 0.39
FREM1Q5H8C1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
FREM1Q5H8C1 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FREM1Q5H8C1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FREM1Q5H8C1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FREM1Q5H8C1 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FREM1Q5H8C1 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.46■□□□□ 0.39
FREM1Q5H8C1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
FREM1Q5H8C1 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FREM1Q5H8C1 AL355075.4-201ENST00000554988 638 ntBASIC17.46■□□□□ 0.39
FREM1Q5H8C1 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.46■□□□□ 0.39
FREM1Q5H8C1 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.46■□□□□ 0.39
FREM1Q5H8C1 RN7SL471P-201ENST00000580476 299 ntBASIC17.46■□□□□ 0.39
FREM1Q5H8C1 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.46■□□□□ 0.39
FREM1Q5H8C1 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FREM1Q5H8C1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
FREM1Q5H8C1 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
FREM1Q5H8C1 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.38
FREM1Q5H8C1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FREM1Q5H8C1 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms