Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 TFG-210ENST00000620299 1289 ntTSL 5 BASIC15.15■□□□□ 0.02
HIST1H1AQ02539 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC15.15■□□□□ 0.02
HIST1H1AQ02539 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
HIST1H1AQ02539 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
HIST1H1AQ02539 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H1AQ02539 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
HIST1H1AQ02539 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
HIST1H1AQ02539 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
HIST1H1AQ02539 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC15.15■□□□□ 0.02
HIST1H1AQ02539 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HIST1H1AQ02539 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H1AQ02539 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H1AQ02539 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H1AQ02539 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HIST1H1AQ02539 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HIST1H1AQ02539 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC15.14■□□□□ 0.01
HIST1H1AQ02539 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
HIST1H1AQ02539 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HIST1H1AQ02539 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HIST1H1AQ02539 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST1H1AQ02539 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST1H1AQ02539 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST1H1AQ02539 DPP3P2-201ENST00000416030 1696 ntBASIC15.14■□□□□ 0.01
HIST1H1AQ02539 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HIST1H1AQ02539 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
HIST1H1AQ02539 PGM5P4-201ENST00000421970 445 ntBASIC15.14■□□□□ 0.01
HIST1H1AQ02539 KRT18P11-201ENST00000435214 1283 ntBASIC15.14■□□□□ 0.01
HIST1H1AQ02539 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC15.14■□□□□ 0.01
HIST1H1AQ02539 TERF1P5-201ENST00000477545 1207 ntBASIC15.14■□□□□ 0.01
HIST1H1AQ02539 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
HIST1H1AQ02539 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HIST1H1AQ02539 SPI1-203ENST00000533030 661 ntTSL 2 BASIC15.14■□□□□ 0.01
HIST1H1AQ02539 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC15.14■□□□□ 0.01
HIST1H1AQ02539 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
HIST1H1AQ02539 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC15.14■□□□□ 0.01
HIST1H1AQ02539 AC010536.3-201ENST00000620306 533 ntBASIC15.14■□□□□ 0.01
HIST1H1AQ02539 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC15.14■□□□□ 0.01
HIST1H1AQ02539 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HIST1H1AQ02539 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.14■□□□□ 0.01
HIST1H1AQ02539 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC15.14■□□□□ 0.01
HIST1H1AQ02539 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST1H1AQ02539 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST1H1AQ02539 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC15.14■□□□□ 0.01
HIST1H1AQ02539 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC15.14■□□□□ 0.01
HIST1H1AQ02539 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST1H1AQ02539 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC15.14■□□□□ 0.01
HIST1H1AQ02539 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC15.14■□□□□ 0.01
HIST1H1AQ02539 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.14■□□□□ 0.01
HIST1H1AQ02539 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST1H1AQ02539 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST1H1AQ02539 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
HIST1H1AQ02539 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HIST1H1AQ02539 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
HIST1H1AQ02539 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
HIST1H1AQ02539 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST1H1AQ02539 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC15.13■□□□□ 0.01
HIST1H1AQ02539 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
HIST1H1AQ02539 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
HIST1H1AQ02539 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
HIST1H1AQ02539 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST1H1AQ02539 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HIST1H1AQ02539 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
HIST1H1AQ02539 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST1H1AQ02539 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HIST1H1AQ02539 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC15.13■□□□□ 0.01
HIST1H1AQ02539 AC016769.1-201ENST00000409132 1010 ntBASIC15.13■□□□□ 0.01
HIST1H1AQ02539 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST1H1AQ02539 KRT8P36-201ENST00000489121 1440 ntBASIC15.13■□□□□ 0.01
HIST1H1AQ02539 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
HIST1H1AQ02539 MIR6821-201ENST00000617625 74 ntBASIC15.13■□□□□ 0.01
HIST1H1AQ02539 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC15.13■□□□□ 0.01
HIST1H1AQ02539 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST1H1AQ02539 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HIST1H1AQ02539 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST1H1AQ02539 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST1H1AQ02539 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST1H1AQ02539 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC15.13■□□□□ 0.01
HIST1H1AQ02539 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HIST1H1AQ02539 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC15.13■□□□□ 0.01
HIST1H1AQ02539 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST1H1AQ02539 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST1H1AQ02539 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
HIST1H1AQ02539 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC15.12■□□□□ 0.01
HIST1H1AQ02539 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST1H1AQ02539 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST1H1AQ02539 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST1H1AQ02539 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST1H1AQ02539 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC15.12■□□□□ 0.01
HIST1H1AQ02539 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.12■□□□□ 0.01
HIST1H1AQ02539 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HIST1H1AQ02539 STX7-201ENST00000367937 1090 ntTSL 5 BASIC15.12■□□□□ 0.01
HIST1H1AQ02539 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST1H1AQ02539 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC15.12■□□□□ 0.01
HIST1H1AQ02539 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HIST1H1AQ02539 CASP6-205ENST00000505486 538 ntTSL 4 BASIC15.12■□□□□ 0.01
HIST1H1AQ02539 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST1H1AQ02539 AL591742.1-201ENST00000604433 565 ntBASIC15.12■□□□□ 0.01
HIST1H1AQ02539 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
HIST1H1AQ02539 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST1H1AQ02539 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms