Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
IRX4P78413 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
IRX4P78413 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.57■□□□□ 0.88
IRX4P78413 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
IRX4P78413 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
IRX4P78413 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.57■□□□□ 0.88
IRX4P78413 AC233263.1-201ENST00000578059 224 ntBASIC20.57■□□□□ 0.88
IRX4P78413 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
IRX4P78413 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
IRX4P78413 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
IRX4P78413 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
IRX4P78413 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
IRX4P78413 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
IRX4P78413 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
IRX4P78413 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.56■□□□□ 0.88
IRX4P78413 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.56■□□□□ 0.88
IRX4P78413 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
IRX4P78413 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
IRX4P78413 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
IRX4P78413 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
IRX4P78413 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.56■□□□□ 0.88
IRX4P78413 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
IRX4P78413 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
IRX4P78413 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.56■□□□□ 0.88
IRX4P78413 AC010331.1-201ENST00000611423 582 ntBASIC20.56■□□□□ 0.88
IRX4P78413 AL589743.5-201ENST00000616611 1050 ntBASIC20.56■□□□□ 0.88
IRX4P78413 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
IRX4P78413 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
IRX4P78413 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
IRX4P78413 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.56■□□□□ 0.88
IRX4P78413 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
IRX4P78413 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
IRX4P78413 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
IRX4P78413 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
IRX4P78413 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
IRX4P78413 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.55■□□□□ 0.88
IRX4P78413 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
IRX4P78413 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.55■□□□□ 0.88
IRX4P78413 CDV3P1-201ENST00000471403 739 ntBASIC20.55■□□□□ 0.88
IRX4P78413 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.55■□□□□ 0.88
IRX4P78413 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.55■□□□□ 0.88
IRX4P78413 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
IRX4P78413 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
IRX4P78413 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
IRX4P78413 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
IRX4P78413 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
IRX4P78413 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.54■□□□□ 0.88
IRX4P78413 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.54■□□□□ 0.88
IRX4P78413 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.54■□□□□ 0.88
IRX4P78413 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
IRX4P78413 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.54■□□□□ 0.88
IRX4P78413 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.54■□□□□ 0.88
IRX4P78413 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.54■□□□□ 0.88
IRX4P78413 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
IRX4P78413 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
IRX4P78413 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
IRX4P78413 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
IRX4P78413 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.54■□□□□ 0.88
IRX4P78413 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
IRX4P78413 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
IRX4P78413 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.54■□□□□ 0.88
IRX4P78413 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
IRX4P78413 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
IRX4P78413 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
IRX4P78413 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
IRX4P78413 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IRX4P78413 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
IRX4P78413 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IRX4P78413 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IRX4P78413 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
IRX4P78413 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
IRX4P78413 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IRX4P78413 MCRIP2P1-201ENST00000394346 511 ntBASIC20.53■□□□□ 0.88
IRX4P78413 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.53■□□□□ 0.88
IRX4P78413 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
IRX4P78413 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
IRX4P78413 LINC01023-201ENST00000606054 436 ntBASIC20.53■□□□□ 0.88
IRX4P78413 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.53■□□□□ 0.88
IRX4P78413 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.53■□□□□ 0.88
IRX4P78413 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.53■□□□□ 0.88
IRX4P78413 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
IRX4P78413 AL512408.1-201ENST00000569378 2000 ntBASIC20.53■□□□□ 0.88
IRX4P78413 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IRX4P78413 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IRX4P78413 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
IRX4P78413 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
IRX4P78413 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
IRX4P78413 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.52■□□□□ 0.88
IRX4P78413 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
IRX4P78413 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
IRX4P78413 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
IRX4P78413 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
IRX4P78413 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.52■□□□□ 0.88
IRX4P78413 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
IRX4P78413 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.52■□□□□ 0.88
IRX4P78413 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
IRX4P78413 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
IRX4P78413 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
IRX4P78413 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
IRX4P78413 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms